RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 AZIN1O14977 448 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 STK16O75716 305 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 BRI3O95415 125 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 NUDT14O95848 222 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 TSPAN13O95857 204 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 RPS17P08708 135 aaKnown RBP4.11□□□□□ -1.75
RTF1-204ENST00000558117 CCNOP22674 350 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 DCKP27707 260 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 P2RX1P51575 399 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 BLCAPP62952 87 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 PRB3Q04118 309 aaPredicted RBP4.11□□□□□ -1.75
RTF1-204ENST00000558117 GSG1Q2KHT4 349 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 LRRC75BQ2VPJ9 315 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 C22orf42Q6IC83 251 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 MED27Q6P2C8 311 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 EPGNQ6UW88 154 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 LYPD2Q6UXB3 125 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 C11orf53Q8IXP5 236 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 OR2L13Q8N349 312 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 SAMD12Q8N8I0 201 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 OR4X2Q8NGF9 303 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 OR52I1Q8NGK6 324 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 OR6T1Q8NGN1 323 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 PLPPR1Q8TBJ4 325 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 GPR151Q8TDV0 419 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 L3HYPDHQ96EM0 354 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 OPALINQ96PE5 141 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 ARHGDIGQ99819 225 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 NANSQ9NR45 359 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 OPTCQ9UBM4 332 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 EIF3KQ9UBQ5 218 aaKnown RBP4.11□□□□□ -1.75
RTF1-204ENST00000558117 ZNF225Q9UK10 706 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 RBMX2Q9Y388 322 aaKnown RBP4.11□□□□□ -1.75
RTF1-204ENST00000558117 H3BMQ9 156 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 MANBAO00462 879 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 SIVA1O15304 175 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 HDAC3O15379 428 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 ZNF253O75346 499 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 PSMG1O95456 288 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 ALDOBP05062 364 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 PAX6P26367 422 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 CRATP43155 626 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 TNFAIP6P98066 277 aaPredicted RBP4.1□□□□□ -1.75
RTF1-204ENST00000558117 QPRTQ15274 297 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 ZNF404Q494X3 552 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 SLC16A14Q7RTX9 510 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 OR2W3Q7Z3T1 314 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 HDDC2Q7Z4H3 204 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 NKAIN4Q8IVV8 208 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 LRRC75AQ8NAA5 344 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 TMEM104Q8NE00 496 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 KLHL30-AS1Q8NEE0 82 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 TWIST2Q8WVJ9 160 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 CLCC1Q96S66 551 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 C1orf50Q9BV19 199 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 LINC00470Q9BZP3 86 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 OR51B6Q9H340 312 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 OR51M1Q9H341 326 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 KLK5Q9Y337 293 aaPredicted RBP4.1□□□□□ -1.75
RTF1-204ENST00000558117 HDGFL3Q9Y3E1 203 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 DNAJC15Q9Y5T4 150 aa4.1□□□□□ -1.75
RTF1-204ENST00000558117 TRBV9A0A0B4J1U6 114 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 TRBV7-9A0A0J9YWB2 115 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 A0A1B0GVI7 797 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 AIREO43918 545 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 FSTL3O95633 263 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 PDYNP01213 254 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 CD79AP11912 226 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 SPNP16150 400 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 SLC6A1P30531 599 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 IFNA8P32881 189 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 GABRA3P34903 492 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 SERPINB5P36952 375 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 NAA10P41227 235 aaPredicted RBP4.09□□□□□ -1.75
RTF1-204ENST00000558117 KCNJ3P48549 501 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 MRPL19P49406 292 aaKnown RBP4.09□□□□□ -1.75
RTF1-204ENST00000558117 PKNOX1P55347 436 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 DLX1P56177 255 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 RAB25P57735 213 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 OR2B6P58173 313 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 RPL8P62917 257 aaKnown RBP4.09□□□□□ -1.75
RTF1-204ENST00000558117 KLRD1Q13241 179 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 NDUFAF6Q330K2 333 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 C6orf183Q5T699 404 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 FAM27D1Q5T7N8 215 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 STUMQ69YW2 141 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 PVRIGQ6DKI7 326 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 REEP3Q6NUK4 255 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 SLC25A48Q6ZT89 311 aaKnown RBP4.09□□□□□ -1.75
RTF1-204ENST00000558117 RBM45Q8IUH3 476 aaKnown RBP4.09□□□□□ -1.75
RTF1-204ENST00000558117 TPRX1Q8N7U7 411 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 ZNF491Q8N8L2 437 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 OR52H1Q8NGJ2 320 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 OR52E5Q8NH55 327 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 TNFRSF14Q92956 283 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 MRGPRFQ96AM1 343 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 TSSK3Q96PN8 268 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 ZNF382Q96SR6 550 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 SLC35A5Q9BS91 424 aa4.09□□□□□ -1.75
RTF1-204ENST00000558117 HINT2Q9BX68 163 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms