RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PNLIPRP3Q17RR3 467 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 IZUMO1Q8IYV9 350 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 OR52L2PQ8NGH6 319 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 SSMEM1Q8WWF3 244 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 IL1F10Q8WWZ1 152 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 CMTM3Q96MX0 182 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 MMP28Q9H239 520 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 DPM3Q9P2X0 92 aa20.7■□□□□ 0.9
SMAD6-202ENST00000557916 ATRQ13535 2644 aa20.69■□□□□ 0.9
SMAD6-202ENST00000557916 A0A1W2PPE3 182 aa20.69■□□□□ 0.9
SMAD6-202ENST00000557916 IER3P46695 156 aa20.69■□□□□ 0.9
SMAD6-202ENST00000557916 GNG2P59768 71 aa20.69■□□□□ 0.9
SMAD6-202ENST00000557916 DYNAPQ8N1N2 210 aa20.69■□□□□ 0.9
SMAD6-202ENST00000557916 DYNC2LI1Q8TCX1 351 aa20.69■□□□□ 0.9
SMAD6-202ENST00000557916 CREB3L1Q96BA8 519 aa20.69■□□□□ 0.9
SMAD6-202ENST00000557916 ZNF230Q9UIE0 474 aaPredicted RBP20.69■□□□□ 0.9
SMAD6-202ENST00000557916 HILPDAQ9Y5L2 63 aa20.69■□□□□ 0.9
SMAD6-202ENST00000557916 LEUTXA8MZ59 168 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 TRDCB7Z8K6 153 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 BUB1B-PAK6H3BSN5 160 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 XRCC3O43542 346 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 IGHV4-59P01825 116 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 APOA1P02647 267 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 EIF4EP06730 217 aaKnown RBP20.68■□□□□ 0.9
SMAD6-202ENST00000557916 UBA52P62987 128 aaKnown RBP20.68■□□□□ 0.9
SMAD6-202ENST00000557916 PITPNAQ00169 270 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 Q3ZCU0 254 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 DTX3Q8N9I9 347 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 NUDCD2Q8WVJ2 157 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 RBM38Q9H0Z9 239 aaKnown RBP20.68■□□□□ 0.9
SMAD6-202ENST00000557916 AUNIPQ9H7T9 357 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 TNFRSF19Q9NS68 423 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 JPT1Q9UK76 154 aa20.68■□□□□ 0.9
SMAD6-202ENST00000557916 AMMECR1Q9Y4X0 333 aaPredicted RBP20.68■□□□□ 0.9
SMAD6-202ENST00000557916 CLDN34H7C241 214 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 TRIM77I1YAP6 450 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 HPGDSO60760 199 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 SCTP09683 121 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 CEACAM3P40198 252 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 GNMTQ14749 295 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 TMEM86BQ8N661 226 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 C8orf31Q8N9H6 132 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 OR10X1Q8NGY0 326 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 MAFIPQ8WZ33 124 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 DPAGT1Q9H3H5 408 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 POMT1Q9Y6A1 747 aa20.67■□□□□ 0.9
SMAD6-202ENST00000557916 DTYMKP23919 212 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 PPP1CCP36873 323 aaKnown RBP20.66■□□□□ 0.9
SMAD6-202ENST00000557916 MNDAP41218 407 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 KIR2DS4P43632 304 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 KIR2DS1Q14954 304 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 MORN2Q502X0 79 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 PLA1AQ53H76 456 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 TMEM69Q5SWH9 247 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 STEAP3Q658P3 488 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 LINC00311Q8N616 119 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 SSX3Q99909 188 aa20.66■□□□□ 0.9
SMAD6-202ENST00000557916 CCDC59Q9P031 241 aaKnown RBP20.66■□□□□ 0.9
SMAD6-202ENST00000557916 RSL24D1Q9UHA3 163 aaKnown RBP20.66■□□□□ 0.9
SMAD6-202ENST00000557916 YPEL1O60688 119 aa20.65■□□□□ 0.9
SMAD6-202ENST00000557916 ELK1P19419 428 aa20.65■□□□□ 0.9
SMAD6-202ENST00000557916 SRSF7Q16629 238 aaKnown RBP eCLIP20.65■□□□□ 0.9
SMAD6-202ENST00000557916 LRRC75BQ2VPJ9 315 aa20.65■□□□□ 0.9
SMAD6-202ENST00000557916 ZNF439Q8NDP4 499 aa20.65■□□□□ 0.9
SMAD6-202ENST00000557916 YPEL2Q96QA6 119 aa20.65■□□□□ 0.9
SMAD6-202ENST00000557916 SMIM31A0A1B0GVY4 71 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 BTBD17A6NE02 478 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 LY6LH3BQJ8 138 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 FABP7O15540 132 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 SSX5O60225 188 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 RGS11O94810 467 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 ZNF134P52741 427 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 TAS2R20P59543 309 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 AANATQ16613 207 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 TPTE2P1Q5T6R2 138 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 SLC25A48Q6ZT89 311 aaKnown RBP20.64■□□□□ 0.89
SMAD6-202ENST00000557916 OR4A4PQ8NGN8 299 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 OCSTAMPQ9BR26 566 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 ST6GALNAC5Q9BVH7 336 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 SLC23A1Q9UHI7 598 aa20.64■□□□□ 0.89
SMAD6-202ENST00000557916 SLC31A2O15432 143 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 RNASE1P07998 156 aaKnown RBP20.63■□□□□ 0.89
SMAD6-202ENST00000557916 PTHLHP12272 177 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 MADCAM1Q13477 382 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 CT45A1Q5HYN5 189 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 Q6ZS49 121 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 OR5R1Q8NH85 324 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 CT45A3Q8NHU0 189 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 ZFAND2BQ8WV99 257 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 CHIAQ9BZP6 476 aa20.63■□□□□ 0.89
SMAD6-202ENST00000557916 IGKV1-6A0A0C4DH72 117 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 VGLL3A8MV65 326 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 FAM25AB3EWG3 89 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 FAM25CB3EWG5 89 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 FAM25GB3EWG6 89 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 H3BUX3 64 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 ZNF701M0R085 212 aaPredicted RBP20.62■□□□□ 0.89
SMAD6-202ENST00000557916 HSPA12AO43301 675 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 GSTT2P0CG29 244 aa20.62■□□□□ 0.89
SMAD6-202ENST00000557916 GSTT2BP0CG30 244 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms