RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 TRPM7Q96QT4 1865 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 CLPSP04118 112 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 WNT5AP41221 380 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 CXCL12P48061 93 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 BPIFB3P59826 476 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 LSM6P62312 80 aaKnown RBP4.31□□□□□ -1.72
SYNE2-223ENST00000557005 PSG5Q15238 335 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 FBXO46Q6PJ61 603 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-223ENST00000557005 TUSC5Q8IXB3 177 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 OR10S1Q8NGN2 331 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 FLVCR1-AS1Q8TAF5 88 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 PPP1R35Q8TAP8 253 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 C10orf35Q96D05 121 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 MISP3Q96FF7 219 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 P4HTMQ9NXG6 502 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 VWA8A3KMH1 1905 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 THSD7BQ9C0I4 1608 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 AMY1AP04745 511 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 CYC1P08574 325 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 FXYD3Q14802 87 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 ATP6V1FQ16864 119 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 ERASQ7Z444 233 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 PAQR4Q8N4S7 273 aaPredicted RBP4.31□□□□□ -1.72
SYNE2-223ENST00000557005 TCTEX1D1Q8N7M0 179 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 OR10X1Q8NGY0 326 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 RFESDQ8TAC1 157 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 ABHD3Q8WU67 409 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 RBM14Q96PK6 669 aaKnown RBP4.31□□□□□ -1.72
SYNE2-223ENST00000557005 HSD17B10Q99714 261 aaKnown RBP4.31□□□□□ -1.72
SYNE2-223ENST00000557005 RTN4RQ9BZR6 473 aa4.31□□□□□ -1.72
SYNE2-223ENST00000557005 CXorf1O96002 111 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CD5P06127 495 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 SP1P08047 785 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 ADMP35318 185 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CAMPP49913 170 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 TNFRSF9Q07011 255 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OR4A47Q6IF82 309 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HEPN1Q6WQI6 88 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 TCF23Q7RTU1 214 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 AGBL5Q8NDL9 886 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OR2Z1Q8NG97 314 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OR1B1Q8NGR6 318 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OR5R1Q8NH85 324 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 IMMP2LQ96T52 175 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 TIMM9Q9Y5J7 89 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 SPRY3O43610 288 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 SYNGR1O43759 233 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CT45A6P0DMU7 189 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CT45A5P0DMU8 189 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CT45A7P0DMV0 189 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OTX1P32242 354 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-223ENST00000557005 NPBWR2P48146 333 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 PSG4Q00888 419 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CT45A1Q5HYN5 189 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 WDR73Q6P4I2 378 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 ZNF645Q8N7E2 425 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CADM4Q8NFZ8 388 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CT45A3Q8NHU0 189 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OIT3Q8WWZ8 545 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 RASL10BQ96S79 203 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 DUSP15Q9H1R2 295 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-223ENST00000557005 ARL14EPLP0DKL9 152 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 DEFA4P12838 97 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 UQCRFS1P47985 274 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 AESQ08117 197 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 FHL1Q13642 323 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OR1C1Q15619 314 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 MST1LQ2TV78 715 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 DMRTA1Q5VZB9 504 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 TRAT1Q6PIZ9 186 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 M1APQ8TC57 530 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 ZDHHC16Q969W1 377 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 STARD4Q96DR4 205 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 GSX1Q9H4S2 264 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-223ENST00000557005 IGKV1D-8A0A087WSZ0 117 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CTXND1A0A1B0GTU2 59 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OOEPA6NGQ2 149 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 SLC22A20A6NK97 555 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BKO60814 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 CDS2O95674 445 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BJP06899 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BOP23527 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BBP33778 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 AMTP48728 403 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BDP58876 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BCP62807 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST2H2BEQ16778 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-223ENST00000557005 KMT5CQ86Y97 462 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 OR8I2Q8N0Y5 310 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST3H2BBQ8N257 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 DEFB108BQ8NET1 73 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 FAM216AQ8WUB2 273 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BHQ93079 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BNQ99877 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 HIST1H2BMQ99879 126 aa4.3□□□□□ -1.72
SYNE2-223ENST00000557005 A0A0U1RQV5 110 aa4.29□□□□□ -1.72
SYNE2-223ENST00000557005 OR5B21A6NL26 309 aa4.29□□□□□ -1.72
SYNE2-223ENST00000557005 LIFP15018 202 aa4.29□□□□□ -1.72
SYNE2-223ENST00000557005 EGR1P18146 543 aa4.29□□□□□ -1.72
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