RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ELK1P19419 428 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 CD24P25063 80 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 TNFSF8P32971 234 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 IL18Q14116 193 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 TMEM95Q3KNT9 176 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 OR10K2Q6IF99 312 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 TMEM104Q8NE00 496 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 OR9G1Q8NH87 305 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 LEAP2Q969E1 77 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 WDR12Q9GZL7 423 aaKnown RBP8.27□□□□□ -1.09
SHMT2-224ENST00000556737 WNT10AQ9GZT5 417 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 CST11Q9H112 138 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 ATG5Q9H1Y0 275 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 MMP28Q9H239 520 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 MIXL1Q9H2W2 232 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 RHBDL2Q9NX52 303 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 IDI2-AS1Q9NZ38 188 aa8.27□□□□□ -1.09
SHMT2-224ENST00000556737 MRPS7Q9Y2R9 242 aaKnown RBP8.27□□□□□ -1.09
SHMT2-224ENST00000556737 A0A1W2PPI3 338 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 TMEM30CPA0ZSE6 113 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 METTL21EPA6NDL7 271 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 LEUTXA8MZ59 168 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 J3QR06 171 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 KCNAB3O43448 404 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 NFYBP25208 207 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 DIAPH2-AS1Q14236 149 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 C2orf68Q2NKX9 166 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 PYDC2Q56P42 97 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 ZNF497Q6ZNH5 498 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 IZUMO1Q8IYV9 350 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 GAPTQ8N292 157 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 C11orf44Q8N8P7 122 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 OR10A7Q8NGE5 316 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 RFESDQ8TAC1 157 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 KCNG3Q8TAE7 436 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 S100A16Q96FQ6 103 aaKnown RBP8.26□□□□□ -1.09
SHMT2-224ENST00000556737 Q96M66 194 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 TMEM59Q9BXS4 323 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 BANF2Q9H503 90 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 PCDHB16Q9NRJ7 776 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 GHRLQ9UBU3 117 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 RAB22AQ9UL26 194 aa8.26□□□□□ -1.09
SHMT2-224ENST00000556737 TOR1AO14656 332 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 IGHV3-7P01780 117 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 APOA1P02647 267 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 AMY1AP04745 511 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 AMY2AP04746 511 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 VSIG10L2P0DP72 767 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 VSIG8P0DPA2 414 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 MGMTP16455 207 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 CEACAM3P40198 252 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 GNG10P50151 68 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 SCAND1P57086 179 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 BLCAPP62952 87 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 PLA2G7Q13093 441 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 GPR176Q14439 515 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 RBM39Q14498 530 aaKnown RBP8.25□□□□□ -1.09
SHMT2-224ENST00000556737 LTC4SQ16873 150 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 RNASE12Q5GAN4 147 aaKnown RBP8.25□□□□□ -1.09
SHMT2-224ENST00000556737 TMEM69Q5SWH9 247 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 ATAD3CQ5T2N8 411 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 SIGIRRQ6IA17 410 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 FAM53AQ6NSI3 398 aaPredicted RBP8.25□□□□□ -1.09
SHMT2-224ENST00000556737 LINC00299Q6ZSB3 139 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 Q6ZTK2 550 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 C16orf82Q7Z2V1 217 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 OR2W3Q7Z3T1 314 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 ZNF565Q8N9K5 539 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 NEK7Q8TDX7 302 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 TOMM40LQ969M1 308 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 CREB3L1Q96BA8 519 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 MRPS24Q96EL2 167 aaKnown RBP8.25□□□□□ -1.09
SHMT2-224ENST00000556737 OCSTAMPQ9BR26 566 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 URM1Q9BTM9 101 aaKnown RBP8.25□□□□□ -1.09
SHMT2-224ENST00000556737 SELENOIQ9C0D9 397 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 PRSS22Q9GZN4 317 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 AKIP1Q9NQ31 210 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 DIABLOQ9NR28 239 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 PSG11Q9UQ72 335 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 NOTCH1P46531 2555 aa8.25□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A10PA6NDY2 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A18PA6NE21 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A16PA6NEW6 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A20PA6NIJ5 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A7PA6NKC0 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A9PA6NNJ1 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 ADARB2-AS1A8MUL3 147 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A12PA8MX19 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A5PA8MXJ8 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A23PA8MXZ1 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 OOSP1A8MZH6 123 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 J3QRK9 145 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 OR2F2O95006 317 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 MT-ND4P03905 459 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A15PP0C7V4 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A13PP0C7W8 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A14PP0C7W9 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 FAM90A24PP0C7X0 464 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 CD28P10747 220 aa8.24□□□□□ -1.09
SHMT2-224ENST00000556737 CD37P11049 281 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms