RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 DMRTC1Q5HYR2 192 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 ACTL10Q5JWF8 245 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 DNLZQ5SXM8 178 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 FBXW9Q5XUX1 488 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 LINC00336Q6ZUF6 198 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 SH2D6Q7Z4S9 175 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 LRRC28Q86X40 367 aaPredicted RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 ZNF547Q8IVP9 402 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 LRRC52Q8N7C0 313 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 SLC26A10Q8NG04 563 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 OR4M2Q8NGB6 313 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 SYNPRQ8TBG9 265 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 PLPPR1Q8TBJ4 325 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 ABHD3Q8WU67 409 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 RGP1Q92546 391 aaPredicted RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 UCN3Q969E3 161 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.39□□□□□ -2.03
SRP54-209ENST00000555746 BTF3L4Q96K17 158 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 HBEGFQ99075 208 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 ATP5SQ99766 215 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 MED18Q9BUE0 208 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 CDCA4Q9BXL8 241 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 UGT2B28Q9BY64 529 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 NXF5Q9H1B4 397 aaKnown RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 NIT2Q9NQR4 276 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 IL36GQ9NZH8 169 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 CD84Q9UIB8 345 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 GNG8Q9UK08 70 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 C14orf166Q9Y224 244 aaKnown RBP2.39□□□□□ -2.03
SRP54-209ENST00000555746 SLC17A4Q9Y2C5 497 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 USF3Q68DE3 2245 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 ROS1P08922 2347 aa2.39□□□□□ -2.03
SRP54-209ENST00000555746 A0A0A6YYD5 115 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 NSG1A0A0A6YYJ2 146 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 ZNF816-ZNF321PA0A0X1KG74 233 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 SMIM31A0A1B0GVY4 71 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 ANKRD20A5PA0PJZ0 165 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 PRORSD1PA6NEY8 169 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 CLDN24A6NM45 220 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 DHRS7CA6NNS2 312 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TRAPPC2LH3BP13 241 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 PLPP1O14494 284 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 MSH4O15457 936 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TAPBPO15533 448 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 CYB5BO43169 146 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 ERI3O43414 337 aaKnown RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 MPZL2O60487 215 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 CDC40O60508 579 aaKnown RBP eCLIP2.38□□□□□ -2.03
SRP54-209ENST00000555746 EIF4E2O60573 245 aaKnown RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 GGCTO75223 188 aaKnown RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 ALOX12BO75342 701 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 MPDU1O75352 247 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 ATP5LO75964 103 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 LYPD3O95274 346 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 CCNE2O96020 404 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 SERPINA7P05543 415 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 HTR1AP08908 422 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 HOXC4P09017 264 aaPredicted RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 H2BFMP0C1H6 154 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 MGMTP16455 207 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 ALOX5APP20292 161 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 OMGP23515 440 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 GCAP28676 217 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 FGF9P31371 208 aaPredicted RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 CCR2P41597 374 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 NSG1P42857 185 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 BDKRB1P46663 353 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 RPL29P47914 159 aaKnown RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 STC1P52823 247 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TCL1AP56279 114 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 KLF3P57682 345 aaPredicted RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 GNG3P63215 75 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 SP4Q02446 784 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 EMX2Q04743 252 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 ZNF616Q08AN1 781 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TWF1Q12792 350 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 LAGE3Q14657 143 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 PRSS8Q16651 343 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 ZNF630Q2M218 657 aaPredicted RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 TBC1D28Q2M2D7 210 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TRMT5Q32P41 509 aaKnown RBP2.38□□□□□ -2.03
SRP54-209ENST00000555746 TIGITQ495A1 244 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 PYCR3Q53H96 274 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 FAM78BQ5VT40 261 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 SAMD13Q5VXD3 122 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 SMARCD3Q6STE5 483 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 PLET1Q6UQ28 207 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TMEM205Q6UW68 189 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TFAP2EQ6VUC0 442 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 MOB1BQ7L9L4 216 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TCF24Q7RTU0 167 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 SLC30A8Q8IWU4 369 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 SLC35F2Q8IXU6 374 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 CMTM1Q8IZ96 169 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 DAW1Q8N136 415 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 LINC01561Q8N1V8 128 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 OR2T33Q8NG76 320 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 OR13G1Q8NGZ3 307 aa2.38□□□□□ -2.03
SRP54-209ENST00000555746 TRUB1Q8WWH5 349 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms