RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ZBTB25P24278 435 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 ACTBL2Q562R1 376 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 ATPAF1Q5TC12 328 aaPredicted RBP8.44□□□□□ -1.06
NEK9-205ENST00000555405 TMEM200BQ69YZ2 307 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 Q6ZNX1 250 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 SUCNR1Q9BXA5 334 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 NAV3Q8IVL0 2385 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 IGHV3OR16-10A0A075B7F0 116 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 SIX6O95475 246 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 IGHV2-70P01814 119 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 CD74P04233 296 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 SSTR2P30874 369 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 CD83Q01151 205 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 SSBP1Q04837 148 aaKnown RBP8.44□□□□□ -1.06
NEK9-205ENST00000555405 WDR25Q64LD2 544 aaPredicted RBP8.44□□□□□ -1.06
NEK9-205ENST00000555405 FAM219AQ8IW50 185 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 MUC20Q8N307 709 aaPredicted RBP8.44□□□□□ -1.06
NEK9-205ENST00000555405 IGFBPL1Q8WX77 278 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 DMRTB1Q96MA1 342 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 PCGF1Q9BSM1 259 aa8.44□□□□□ -1.06
NEK9-205ENST00000555405 ABCA2Q9BZC7 2435 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 PEX14O75381 377 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 FCN3O75636 299 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 TPPPO94811 219 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 HLA-AP01891 365 aaKnown RBP8.43□□□□□ -1.06
NEK9-205ENST00000555405 DNASE1P24855 282 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 REG1BP48304 166 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 CLEC12BQ2HXU8 276 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 CADM3Q8N126 398 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 ARRDC1Q8N5I2 433 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 CLDND2Q8NHS1 167 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 MIOXQ9UGB7 285 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 FLNAP21333 2647 aaKnown RBP8.43□□□□□ -1.06
NEK9-205ENST00000555405 CA11O75493 328 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 PIGPP57054 158 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 LYG1Q8N1E2 194 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 C14orf79Q96F83 325 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 PIMREGQ9BSJ6 248 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 SSBP3Q9BWW4 388 aaPredicted RBP8.43□□□□□ -1.06
NEK9-205ENST00000555405 MED28Q9H204 178 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 OR2D2Q9H210 308 aa8.43□□□□□ -1.06
NEK9-205ENST00000555405 SETD2Q9BYW2 2564 aaPredicted RBP8.43□□□□□ -1.06
NEK9-205ENST00000555405 A0A0A6YYJ9 748 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 IGHV4-61A0A0C4DH41 118 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 C13orf42A0A1B0GVH6 325 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 CCSO14618 274 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 SMAD7O15105 426 aaKnown RBP8.42□□□□□ -1.06
NEK9-205ENST00000555405 NDUFA2O43678 99 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 VSIG10L2P0DP72 767 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 LUMP51884 338 aaPredicted RBP8.42□□□□□ -1.06
NEK9-205ENST00000555405 DNM1P46Q6ZS02 220 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 GAPTQ8N292 157 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 DUSP18Q8NEJ0 188 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 OR2AK2Q8NG84 335 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 OR4A4PQ8NGN8 299 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 ZNF714Q96N38 554 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 BAHCC1Q9P281 2608 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 LOC105371242A0A075B767 164 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 OVOL3O00110 214 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 HOXB5P09067 269 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 WNT2P09544 360 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 KCNJ3P48549 501 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 CD300CQ08708 224 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 VAX1Q5SQQ9 334 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 SLC25A21Q9BQT8 299 aaPredicted RBP8.42□□□□□ -1.06
NEK9-205ENST00000555405 PATZ1Q9HBE1 687 aaKnown RBP8.42□□□□□ -1.06
NEK9-205ENST00000555405 MMP26Q9NRE1 261 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 HEXAP06865 529 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 PPP1R1AQ13522 171 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 Q3ZCU0 254 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 AADACL3Q5VUY0 350 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 MOB1BQ7L9L4 216 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 RNASE11Q8TAA1 199 aaKnown RBP8.42□□□□□ -1.06
NEK9-205ENST00000555405 IFT22Q9H7X7 185 aa8.42□□□□□ -1.06
NEK9-205ENST00000555405 A0A0B4J293 547 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 C22orf46C9J442 243 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 SLC31A2O15432 143 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 CTXN2P0C2S0 81 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 OR4E1P0C645 316 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 NAT1P18440 290 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 TBPP20226 339 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 RTN4IP1Q8WWV3 396 aaPredicted RBP8.41□□□□□ -1.06
NEK9-205ENST00000555405 OR51J1Q9H342 316 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 UBE2J1Q9Y385 318 aaPredicted RBP8.41□□□□□ -1.06
NEK9-205ENST00000555405 OR2W1Q9Y3N9 320 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 KBTBD11-OT1A0A1B0GTJ5 212 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 ZFP36P26651 326 aaKnown RBP8.41□□□□□ -1.06
NEK9-205ENST00000555405 GNRHRP30968 328 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 BCAP31P51572 246 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 FAHD2BQ6P2I3 314 aaPredicted RBP8.41□□□□□ -1.06
NEK9-205ENST00000555405 GLDNQ6ZMI3 551 aaPredicted RBP8.41□□□□□ -1.06
NEK9-205ENST00000555405 FOXRED2Q8IWF2 684 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 MINDY2Q8NBR6 621 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 MRGPRFQ96AM1 343 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 FAHD2AQ96GK7 314 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 SEC22AQ96IW7 307 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 MARVELD1Q9BSK0 173 aa8.41□□□□□ -1.06
NEK9-205ENST00000555405 C5orf66Q9H5L9 145 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms