RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 Q8NFD4 153 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 PATZ1Q9HBE1 687 aaKnown RBP13.45□□□□□ -0.26
SYNE3-203ENST00000554873 POLR1DQ9Y2S0 133 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 CEP290O15078 2479 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 HLA-HP01893 362 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 MPLP40238 635 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF121P58317 390 aaPredicted RBP13.45□□□□□ -0.26
SYNE3-203ENST00000554873 RPS20P60866 119 aaKnown RBP13.45□□□□□ -0.26
SYNE3-203ENST00000554873 SRPXP78539 464 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 Q6ZVH6 145 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 D2HGDHQ8N465 521 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 CCDC71LQ8N9Z2 235 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 RNF2Q99496 336 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
SYNE3-203ENST00000554873 TM2D1Q9BX74 207 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 VSTM2BA6NLU5 285 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 HYPMO75409 117 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 IGLC2P0DOY2 106 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 IGLC3P0DOY3 106 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 SHBQ15464 509 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 FAM78BQ5VT40 261 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 C6orf201Q7Z4U5 140 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 C1orf174Q8IYL3 243 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 OR56B2PQ8NGI1 322 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 PARLQ9H300 379 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 ALKBH4Q9NXW9 302 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 BET1LQ9NYM9 111 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 MED12Q93074 2177 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 IGKV1-9A0A0C4DH69 117 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 RER1O15258 196 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 WDR1O75083 606 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 TMEM50AO95807 157 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 GYPAP02724 150 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 MSMO1Q15800 293 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 CXorf66Q5JRM2 361 aaPredicted RBP13.44□□□□□ -0.26
SYNE3-203ENST00000554873 CDCP2Q5VXM1 449 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 SSC4DQ8WTU2 575 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 CST9LQ9H4G1 147 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 VSIRQ9H7M9 311 aa13.44□□□□□ -0.26
SYNE3-203ENST00000554873 A0A1W2PR77 199 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 CD38P28907 300 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 HOXC12P31275 282 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 CLRN1P58418 232 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 MYBPHQ13203 477 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 LDLRAD2Q5SZI1 272 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 C1orf185Q5T7R7 199 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 FAM57BQ71RH2 274 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 OR11L1Q8NGX0 322 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 PLPPR1Q8TBJ4 325 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
SYNE3-203ENST00000554873 PLEKHJ1Q9NW61 149 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 TP53TG3Q9ULZ0 132 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 SDK1Q7Z5N4 2213 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 RALGAPA1Q6GYQ0 2036 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 MYO7BQ6PIF6 2116 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 TNFSF4P23510 183 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 PPP1CBP62140 327 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 CARD17Q5XLA6 110 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 C1QL2Q7Z5L3 287 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 TMEM144Q7Z5S9 345 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 MOB1AQ9H8S9 216 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF286AQ9HBT8 521 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 RNF24Q9Y225 148 aa13.43□□□□□ -0.26
SYNE3-203ENST00000554873 RBM7Q9Y580 266 aaKnown RBP13.43□□□□□ -0.26
SYNE3-203ENST00000554873 A0A1B0GX78 115 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 GRIFINA4D1Z8 144 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 NDUFS8O00217 210 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF205O95201 554 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 ADMP35318 185 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 LINC00310P59036 64 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 RSG1Q9BU20 258 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 A0A1W2PNV4 684 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 E9PLN8 166 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 UEVLDQ8IX04 471 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 MCEMP1Q8IX19 187 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 SCGB1C1Q8TD33 95 aa13.42□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF703Q9H7S9 590 aaPredicted RBP13.42□□□□□ -0.26
SYNE3-203ENST00000554873 PNRC2Q9NPJ4 139 aaKnown RBP13.42□□□□□ -0.26
SYNE3-203ENST00000554873 C5orf63A6NC05 138 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 LMO7DNF2Z398 122 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 VENTXO95231 258 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 TIAF1O95411 115 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 MDH2P40926 338 aaKnown RBP13.41□□□□□ -0.26
SYNE3-203ENST00000554873 NPBWR2P48146 333 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 MRPL30Q8TCC3 161 aaKnown RBP13.41□□□□□ -0.26
SYNE3-203ENST00000554873 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 PTRH2Q9Y3E5 179 aaKnown RBP13.41□□□□□ -0.26
SYNE3-203ENST00000554873 NCOA6Q14686 2063 aaPredicted RBP13.41□□□□□ -0.26
SYNE3-203ENST00000554873 IGHV1OR21-1A0A087WYE8 117 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 IGHV1OR15-9A0A0B4J2B8 117 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 C3orf85A0A1B0GTC6 90 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 SERF1AO75920 110 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 IGHG1P01857 330 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF133P52736 654 aaPredicted RBP13.41□□□□□ -0.26
SYNE3-203ENST00000554873 SUMO3P55854 103 aaPredicted RBP13.41□□□□□ -0.26
SYNE3-203ENST00000554873 ID3Q02535 119 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 CRIP3Q6Q6R5 217 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 GPR146Q96CH1 333 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 STARD4Q96DR4 205 aa13.41□□□□□ -0.26
SYNE3-203ENST00000554873 SMIM12Q96EX1 92 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms