RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.18□□□□□ -1.588e-10■■■■□ 22.6
SCFD1-212ENST00000554486 TRAV18A0A075B6X5 111 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 IGHV4-61A0A0C4DH41 118 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 A0A0G2JMP0 313 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 A0A0X1KG70 313 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 CXorf65A6NEN9 183 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM235A6NFC5 223 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 NKX6-3A6NJ46 265 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 K7N7A8 449 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 NDUFS8O00217 210 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 HSPB6O14558 160 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 NDUFA2O43678 99 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 SCGNO76038 276 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 IGHV2-5P01817 119 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 GLAP06280 429 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 MELTFP08582 738 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 WNT2P09544 360 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 PTHLHP12272 177 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 GNB3P16520 340 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 S100A5P33763 92 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 ETV6P41212 452 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 MNDAP41218 407 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 DSCR9P59020 149 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 TAS2R20P59543 309 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 LMO4P61968 165 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 CLEC12BQ2HXU8 276 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 CDNFQ49AH0 187 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 PAN3Q58A45 887 aaKnown RBP5.18□□□□□ -1.58
SCFD1-212ENST00000554486 Q5PR19 223 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM69Q5SWH9 247 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 ATAD3CQ5T2N8 411 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF626Q68DY1 528 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 PRSS57Q6UWY2 283 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 Q6ZTK2 550 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 OR8H2Q8N162 312 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 MUC20Q8N307 709 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-212ENST00000554486 BPIFB2Q8N4F0 458 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF561Q8N587 486 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 SPICQ8N5J4 248 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM217Q8N7C4 229 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 ASCC1Q8N9N2 400 aaKnown RBP5.18□□□□□ -1.58
SCFD1-212ENST00000554486 OR4M2Q8NGB6 313 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 CLDND2Q8NHS1 167 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 PLPPR1Q8TBJ4 325 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 MSI2Q96DH6 328 aaKnown RBP5.18□□□□□ -1.58
SCFD1-212ENST00000554486 COQ2Q96H96 371 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 MED30Q96HR3 178 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 DIRAS2Q96HU8 199 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 ABHD1Q96SE0 405 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 FOXC2Q99958 501 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 HDHD3Q9BSH5 251 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-212ENST00000554486 CTDSP1Q9GZU7 261 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 CHST6Q9GZX3 395 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 PPA2Q9H2U2 334 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 NARFLQ9H6Q4 476 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF665Q9H7R5 613 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 AUNIPQ9H7T9 357 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 PATZ1Q9HBE1 687 aaKnown RBP5.18□□□□□ -1.58
SCFD1-212ENST00000554486 SPACA1Q9HBV2 294 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCFD1-212ENST00000554486 DIABLOQ9NR28 239 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 PLEKHJ1Q9NW61 149 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 AK3Q9UIJ7 227 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 V9GYH0 126 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 OTOGQ6ZRI0 2925 aa5.18□□□□□ -1.58
SCFD1-212ENST00000554486 FLNAP21333 2647 aaKnown RBP5.18□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF469Q96JG9 3925 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-212ENST00000554486 ABCA1O95477 2261 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 FABP12A6NFH5 140 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 MCRIP1C9JLW8 97 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 DVL1O14640 695 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 SSX5O60225 188 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 CA11O75493 328 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 TPPPO94811 219 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 CSN2P05814 226 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 RPS2P15880 293 aaKnown RBP5.17□□□□□ -1.58
SCFD1-212ENST00000554486 IL2RGP31785 369 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 TALDO1P37837 337 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 SEC61A1P61619 476 aaKnown RBP5.17□□□□□ -1.58
SCFD1-212ENST00000554486 PAX5Q02548 391 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 AESQ08117 197 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 ATXN7L3Q14CW9 347 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-212ENST00000554486 GRK1Q15835 563 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF79Q15937 498 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 HACD4Q5VWC8 232 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 RSBN1Q5VWQ0 802 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-212ENST00000554486 SHEQ5VZ18 495 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 WDR25Q64LD2 544 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-212ENST00000554486 PYHIN1Q6K0P9 492 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 BAIAP2L2Q6UXY1 529 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF497Q6ZNH5 498 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 LINC00299Q6ZSB3 139 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 SLC36A1Q7Z2H8 476 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 SNX29P2Q8IUI4 249 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 GAPTQ8N292 157 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM185AQ8NFB2 350 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 OR8B3Q8NGG8 313 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 NUDCD2Q8WVJ2 157 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 PHF21AQ96BD5 680 aa5.17□□□□□ -1.58
SCFD1-212ENST00000554486 OR8B2Q96RD0 313 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms