RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 IL3RAP26951 378 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 LOXL3P58215 753 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 SSX2Q16385 188 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 HLA-DRB5Q30154 266 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 Q3ZCU0 254 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 LHFPL4Q7Z7J7 247 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 LDLRAD3Q86YD5 345 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 IZUMO1Q8IYV9 350 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 OR4P4Q8NGL7 312 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 DYNC2LI1Q8TCX1 351 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 NUDCD2Q8WVJ2 157 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 SSMEM1Q8WWF3 244 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 ABCB10Q9NRK6 738 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 NDUFA13Q9P0J0 144 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 ZNRD1Q9P1U0 126 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 DPM3Q9P2X0 92 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
TUBB3-202ENST00000553656 DNAJC9-AS1A6NH13 148 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 BUB1B-PAK6H3BSN5 160 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 FABP7O15540 132 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
TUBB3-202ENST00000553656 IGLV1-47P01700 117 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 MELTFP08582 738 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 ZBTB25P24278 435 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 MADCAM1Q13477 382 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 LRRC75BQ2VPJ9 315 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 CCDC144NLQ6NUI1 221 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 TMEM86BQ8N661 226 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 C8orf31Q8N9H6 132 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 DTX3Q8N9I9 347 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 OR52L2PQ8NGH6 319 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 OR4A4PQ8NGN8 299 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 C17orf50Q8WW18 174 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 RPEQ96AT9 228 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 DUX5Q96PT3 197 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 ST6GALNAC5Q9BVH7 336 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 RBM38Q9H0Z9 239 aaKnown RBP11.23□□□□□ -0.61
TUBB3-202ENST00000553656 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 AUNIPQ9H7T9 357 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 TNFRSF19Q9NS68 423 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 SLC23A1Q9UHI7 598 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 ZNF230Q9UIE0 474 aaPredicted RBP11.23□□□□□ -0.61
TUBB3-202ENST00000553656 ELF5Q9UKW6 265 aaPredicted RBP11.23□□□□□ -0.61
TUBB3-202ENST00000553656 MRPS7Q9Y2R9 242 aaKnown RBP11.23□□□□□ -0.61
TUBB3-202ENST00000553656 HILPDAQ9Y5L2 63 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 POMT1Q9Y6A1 747 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 C2CD3Q4AC94 2353 aa11.23□□□□□ -0.61
TUBB3-202ENST00000553656 A0A1W2PPE3 182 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 YPEL1O60688 119 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 VENTXO95231 258 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 LPLP06858 475 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 SCTP09683 121 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 ELK1P19419 428 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 PPP1CCP36873 323 aaKnown RBP11.22□□□□□ -0.61
TUBB3-202ENST00000553656 TAS2R20P59543 309 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 GNMTQ14749 295 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 SRSF7Q16629 238 aaKnown RBP eCLIP11.22□□□□□ -0.61
TUBB3-202ENST00000553656 PLA1AQ53H76 456 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
TUBB3-202ENST00000553656 Q6ZPA2 131 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 OR2AK2Q8NG84 335 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 OR5R1Q8NH85 324 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 MAFIPQ8WZ33 124 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 TOMM40LQ969M1 308 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 DCUN1D5Q9BTE7 237 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 C6orf62Q9GZU0 229 aaPredicted RBP11.22□□□□□ -0.61
TUBB3-202ENST00000553656 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
TUBB3-202ENST00000553656 SVEP1Q4LDE5 3571 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 OOSP1A8MZH6 123 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 CLDN34H7C241 214 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 IGHV4-59P01825 116 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 CBX5P45973 191 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 IER3P46695 156 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 UBA52P62987 128 aaKnown RBP11.21□□□□□ -0.61
TUBB3-202ENST00000553656 SLC9A3R2Q15599 337 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 AANATQ16613 207 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 MORN2Q502X0 79 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 UTF1Q5T230 341 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 TPTE2P1Q5T6R2 138 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 Q6ZS49 121 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 C5orf24Q7Z6I8 188 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 LINC00311Q8N616 119 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 ZDHHC22Q8N966 263 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 MCFD2Q8NI22 146 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 EDARADDQ8WWZ3 215 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 SSX3Q99909 188 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 OCSTAMPQ9BR26 566 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 GINS4Q9BRT9 223 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 ABHD14AQ9BUJ0 271 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 ESM1Q9NQ30 184 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 IFT46Q9NQC8 304 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 EXTL2Q9UBQ6 330 aa11.21□□□□□ -0.61
TUBB3-202ENST00000553656 JMJD1CQ15652 2540 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 H3BUX3 64 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 BET1O15155 118 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 DIRAS3O95661 229 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 GSTT2P0CG29 244 aa11.2□□□□□ -0.62
TUBB3-202ENST00000553656 GSTT2BP0CG30 244 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms