RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 BEX4Q9NWD9 120 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 TAS2R3Q9NYW6 316 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 IL36RNQ9UBH0 155 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 SLC25A10Q9UBX3 287 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 ANXA10Q9UJ72 324 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF222Q9UK12 451 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 ELF5Q9UKW6 265 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 MAB21L2Q9Y586 359 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 NUBP2Q9Y5Y2 271 aa4.16□□□□□ -1.74
VTI1B-202ENST00000553619 KMT2BQ9UMN6 2715 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-202ENST00000553619 CELSR3Q9NYQ7 3312 aa4.15□□□□□ -1.74
VTI1B-202ENST00000553619 ANKHD1Q8IWZ3 2542 aaKnown RBP4.15□□□□□ -1.74
VTI1B-202ENST00000553619 hCG_2014768A0A024R1R8 64 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 PIGBOS1A0A0B4J2F0 54 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 A0A1W2PPR1 153 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ODAMA1E959 279 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF729A6NN14 1252 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 FABP7O15540 132 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 HSPA12AO43301 675 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 SSX4O60224 188 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 PRAF2O60831 178 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF737O75373 536 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 RP2O75695 350 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 IGHV2-70P01814 119 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 PMP2P02689 132 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 TCRBP04435 133 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 LIPFP07098 398 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 WNT2P09544 360 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 GSTT2P0CG29 244 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 OR5H8P0DN80 308 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ZBTB25P24278 435 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 SLC6A1P30531 599 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 HRH1P35367 487 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 OR3A1P47881 315 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 RFX2P48378 723 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 CEBPDP49716 269 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 RAG2P55895 527 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 UCP3P55916 312 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 P2RX3P56373 397 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 GNB2P62879 340 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 HLA-DRB3P79483 266 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 HTD2P86397 168 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 CD69Q07108 199 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ATXN7L3Q14CW9 347 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 OXA1LQ15070 435 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 SURF2Q15527 256 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 SCGB2B2Q4G0G5 96 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 PLA1AQ53H76 456 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 FAM201AQ5SY85 155 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 RSBN1Q5VWQ0 802 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 OR52W1Q6IF63 320 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 CLEC2AQ6UVW9 174 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 CCBE1Q6UXH8 406 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 BTN2A1Q7KYR7 527 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 OVCH2Q7RTZ1 564 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 CENPSQ8N2Z9 138 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ZDHHC22Q8N966 263 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ZNRF1Q8ND25 227 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 OR4C16Q8NGL9 310 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 OR56B4Q8NH76 319 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 OR10J5Q8NHC4 309 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 PLPPR1Q8TBJ4 325 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 MRPL30Q8TCC3 161 aaKnown RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 SNAPC3Q92966 411 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ARL11Q969Q4 196 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 GAFA1Q96PS6 74 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 GINS4Q9BRT9 223 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ALX4Q9H161 411 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 GHITMQ9H3K2 345 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 GAL3ST2Q9H3Q3 398 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 TAF9BQ9HBM6 251 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 GPN1Q9HCN4 374 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 SLC2A8Q9NY64 477 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 EHFQ9NZC4 300 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 CLN8Q9UBY8 286 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF230Q9UIE0 474 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 KIF25Q9UIL4 384 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 TBC1D24Q9ULP9 559 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 C14orf166Q9Y224 244 aaKnown RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 KCNIP3Q9Y2W7 256 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 UBE2J1Q9Y385 318 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 RBM7Q9Y580 266 aaKnown RBP4.15□□□□□ -1.75
VTI1B-202ENST00000553619 LINC00312Q9Y6C7 94 aa4.15□□□□□ -1.75
VTI1B-202ENST00000553619 YLPM1P49750 1951 aaKnown RBP4.14□□□□□ -1.75
VTI1B-202ENST00000553619 FREM2Q5SZK8 3169 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 LOC400499M0QZD8 3231 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 FAM172BPA6NC97 362 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 B5MCH6 92 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 DIRC3C9JPN6 131 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 INMT-MINDY4F8WBC2 141 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 LYNX1G3V0Z9 82 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 M0QYG6 137 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 DVL1O14640 695 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 BET1O15155 118 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 FOXH1O75593 365 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 NDUFB6O95139 128 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 SCTP09683 121 aa4.14□□□□□ -1.75
VTI1B-202ENST00000553619 LYNX1P0DP58 116 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms