RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ST8SIA2Q92186 375 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 RBPMSQ93062 196 aaKnown RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 OR2V2Q96R30 315 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 EGLN1Q9GZT9 426 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 DNTTIP1Q9H147 329 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 PLEKHF2Q9H8W4 249 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 COQ3Q9NZJ6 369 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 OR6C3Q9NZP0 311 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 RNF7Q9UBF6 113 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 NDRG3Q9UGV2 375 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 LAMP3Q9UQV4 416 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 ZFHX2Q9C0A1 2572 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 DOCK10Q96BY6 2186 aa6.13□□□□□ -1.43
ATXN3-221ENST00000553498 EP300Q09472 2414 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-221ENST00000553498 A0A1B0GU03 582 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 RPS10-NUDT3A0A1W2PQS6 291 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 NUDT19A8MXV4 375 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 F5H0A9 414 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 K7EPK0 472 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 ITGB1BP1O14713 200 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 PSPNO60542 156 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 ZNF737O75373 536 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 JTBO76095 146 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 GAPDHP04406 335 aaKnown RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 SERPINE2P07093 398 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 RRASP10301 218 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 PSG2P11465 335 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 IL2RGP31785 369 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 CEACAM6P40199 344 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 GABRA2P47869 451 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 OR3A1P47881 315 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 P2RY1P47900 373 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 TNFAIP6P98066 277 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 COL10A1Q03692 680 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 RAB32Q13637 225 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 GNMTQ14749 295 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 ATXN7L3Q14CW9 347 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 KRBOX4Q5JUW0 171 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 TMEM268Q5VZI3 342 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 ZNF826PQ6ZT77 177 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 FAM219AQ8IW50 185 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 C1orf87Q8N0U7 546 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 GCSAMQ8N6F7 178 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 ZNF645Q8N7E2 425 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 TNRC6AQ8NDV7 1962 aaKnown RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 IL1F10Q8WWZ1 152 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 RNASE6Q93091 150 aaKnown RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 LSM10Q969L4 123 aaKnown RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 SDSLQ96GA7 329 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 CYYR1Q96J86 154 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 TP53RKQ96S44 253 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 ZNF471Q9BX82 626 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 MRPL37Q9BZE1 423 aaKnown RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 MS4A5Q9H3V2 200 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 UFSP2Q9NUQ7 469 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 GSKIPQ9P0R6 139 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 OR14J1Q9UGF5 321 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 CACFD1Q9UGQ2 172 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 ERRFI1Q9UJM3 462 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-221ENST00000553498 JPT1Q9UK76 154 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 FZR1Q9UM11 496 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 POMT1Q9Y6A1 747 aa6.12□□□□□ -1.43
ATXN3-221ENST00000553498 DMXL1Q9Y485 3027 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 IGKV1D-13A0A0B4J2D9 117 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 TRGV8A0A0C4DH27 118 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 DPRXA6NFQ7 191 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 C17orf100A8MU93 164 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 C12orf77C9JDV5 145 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 H0YIZ8 118 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 K7N7A8 449 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 ABCD4O14678 606 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 WNT9BO14905 357 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 GPR137BO60478 399 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 SCAF4O95104 1147 aaKnown RBP6.11□□□□□ -1.43
ATXN3-221ENST00000553498 FSTL3O95633 263 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 LY86O95711 162 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 CFDP00746 253 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-221ENST00000553498 IGHV1-46P01743 117 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 THBDP07204 575 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 IGKV1-13P0DP09 117 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 RPL12P30050 165 aaKnown RBP6.11□□□□□ -1.43
ATXN3-221ENST00000553498 ARHGDIBP52566 201 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 P2RX3P56373 397 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 S100A10P60903 97 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 CATR1Q13166 79 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 EFNB3Q15768 340 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 SP6Q3SY56 376 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 NMSQ5H8A3 153 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 NCMAPQ5T1S8 102 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 TEX36Q5VZQ5 186 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 ZNF66Q6ZN08 573 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 LYZL2Q7Z4W2 148 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 MOGAT3Q86VF5 341 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 LRP11Q86VZ4 500 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 BAP18Q8IXM2 172 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 SELENOHQ8IZQ5 122 aaKnown RBP6.11□□□□□ -1.43
ATXN3-221ENST00000553498 EIF4E3Q8N5X7 224 aaKnown RBP6.11□□□□□ -1.43
ATXN3-221ENST00000553498 CD177Q8N6Q3 437 aa6.11□□□□□ -1.43
ATXN3-221ENST00000553498 SLC35G3Q8N808 338 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms