RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 MRPL27Q9P0M9 148 aaKnown RBP4.87□□□□□ -1.63
TMEM106C-221ENST00000553217 ZNF346Q9UL40 294 aaKnown RBP4.87□□□□□ -1.63
TMEM106C-221ENST00000553217 TRAPPC1Q9Y5R8 145 aa4.87□□□□□ -1.63
TMEM106C-221ENST00000553217 LIPGQ9Y5X9 500 aa4.87□□□□□ -1.63
TMEM106C-221ENST00000553217 HELZ2Q9BYK8 2649 aaKnown RBP4.87□□□□□ -1.63
TMEM106C-221ENST00000553217 IGKV1-8A0A0C4DH67 115 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 KIR2DS5A0A0G2JLQ3 304 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 IGHV1-69-2A0A0G2JMI3 117 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 A0A0G2JNG1 304 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 A0A0J9YY10 115 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 C3orf85A0A1B0GTC6 90 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 A0A1B0GV72 72 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 ALG1L2C9J202 215 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 C9JQL5 133 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 H0Y980 276 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 H0YIG0 161 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 KIR2DS3K7RE56 304 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 RAMP3O60896 148 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 ZNF737O75373 536 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 DHRS3O75911 302 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 NXPH2O95156 264 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 VAMP5O95183 116 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 IGHG1P01857 330 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 BGLAPP02818 100 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 LCATP04180 440 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 CXCL1P09341 107 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 RD3LP0DJH9 198 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 OMGP23515 440 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 IL12BP29460 328 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 GRPRP30550 384 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 CHRNB4P30926 498 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 EMDP50402 254 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 HNRNPA3P51991 378 aaKnown RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 EFNA3P52797 238 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 CLDN15P56746 228 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 COL10A1Q03692 680 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 MALLQ13021 153 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 KIR2DS5Q14953 304 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 RNPS1Q15287 305 aaKnown RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 ACKR1Q16570 336 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 DEFB109BQ30KR1 87 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 PRAMEF20Q5VT98 475 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 WDR25Q64LD2 544 aaPredicted RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 FAM90A2PQ658T7 463 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 SPSB3Q6PJ21 355 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 H1FNTQ75WM6 255 aaPredicted RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 LSRQ86X29 649 aaPredicted RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 MEX3DQ86XN8 651 aaKnown RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 DTX1Q86Y01 620 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 SAXO1Q8IYX7 474 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 LILRA3Q8N6C8 439 aaPredicted RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 WDR31Q8NA23 367 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 ZBTB34Q8NCN2 500 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 GJC3Q8NFK1 279 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 OR5A2Q8NGI9 324 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 OR5C1Q8NGR4 320 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 DAZLQ92904 295 aaKnown RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 SPTSSAQ969W0 71 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 BORCS7Q96B45 105 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 FBXO17Q96EF6 278 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 SFRP2Q96HF1 295 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 IL17FQ96PD4 163 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 SMAD5Q99717 465 aaKnown RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 NRTNQ99748 197 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 GNB1LQ9BYB4 327 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 SAMD10Q9BYL1 202 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 DNAJC4Q9NNZ3 241 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 LIN7CQ9NUP9 197 aaKnown RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 ZNF701Q9NV72 531 aaPredicted RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 FAM206AQ9NX38 181 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 SOHLH2Q9NX45 425 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 B3GAT1Q9P2W7 334 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 COPS7AQ9UBW8 275 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 TBC1D29Q9UFV1 150 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 UBE2J1Q9Y385 318 aaPredicted RBP4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 PXMP4Q9Y6I8 212 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 URGCP-MRPS24S4R325 110 aa4.86□□□□□ -1.63
TMEM106C-221ENST00000553217 MYO18BQ8IUG5 2567 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 A0A0A6YYC8 382 aaPredicted RBP4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 IGHV2OR16-5A0A0B4J2B6 119 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 IGHV2-70DA0A0C4DH43 119 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 MDFIC2A0A1B0GVS7 189 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 PRR19A6NJB7 356 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 LIPT2A6NK58 231 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 VSTM2BA6NLU5 285 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 I3L1I5 382 aaPredicted RBP4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 PLPP3O14495 311 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 MPPED1O15442 326 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 ZNF207O43670 478 aaKnown RBP4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 RAMP1O60894 148 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 ZNF253O75346 499 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 HAND1O96004 215 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 HLA-DQA1P01909 254 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 HLA-DRB1P01911 266 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 CRISP2P16562 243 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 TMEM11P17152 192 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 FUT3P21217 361 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 PTGER4P35408 488 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 AKR1C3P42330 323 aa4.85□□□□□ -1.63
TMEM106C-221ENST00000553217 OR1D4P47884 311 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms