RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 LGALS4P56470 323 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 KRTAP10-3P60369 221 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 MRPS10P82664 201 aaKnown RBP9.29□□□□□ -0.92
TMEM116-218ENST00000552839 GUCA2AQ02747 115 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 PAX8Q06710 450 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 TMEM30BQ3MIR4 351 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 ZNF260Q3ZCT1 412 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 PYDC2Q56P42 97 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 PYHIN1Q6K0P9 492 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 C9orf139Q6ZV77 190 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 RTN4RL2Q86UN3 420 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 C1QL4Q86Z23 238 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 PDZD9Q8IXQ8 264 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 MAFIPQ8WZ33 124 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 LHX4Q969G2 390 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 GALMQ96C23 342 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 GINS4Q9BRT9 223 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 NXF2Q9GZY0 626 aaKnown RBP9.29□□□□□ -0.92
TMEM116-218ENST00000552839 MIXL1Q9H2W2 232 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 SCPEP1Q9HB40 452 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 BEX1Q9HBH7 125 aa9.29□□□□□ -0.92
TMEM116-218ENST00000552839 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.29□□□□□ -0.92
TMEM116-218ENST00000552839 KIAA2026Q5HYC2 2103 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 FAM172BPA6NC97 362 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 TRDCB7Z8K6 153 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 C12orf77C9JDV5 145 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 M0QZ24 198 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 FABP7O15540 132 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 HOXA3O43365 443 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-218ENST00000552839 NAPSAO96009 420 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 HBZP02008 142 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 FCER2P06734 321 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 IGHV1-8P0DP01 117 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 TNFSF8P32971 234 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 ACTBP60709 375 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 RELBQ01201 579 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 HEPN1Q6WQI6 88 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 ZNF554Q86TJ5 538 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 OR1L1Q8NH94 360 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 FCAMRQ8WWV6 532 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 CORO2AQ92828 525 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 OCSTAMPQ9BR26 566 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 Q9N2K0 584 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 OR2S2Q9NQN1 319 aa9.28□□□□□ -0.92
TMEM116-218ENST00000552839 ZNF230Q9UIE0 474 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-218ENST00000552839 RBM7Q9Y580 266 aaKnown RBP9.28□□□□□ -0.92
TMEM116-218ENST00000552839 NOTCH1P46531 2555 aa9.27□□□□□ -0.92
TMEM116-218ENST00000552839 TRBV6-6A0A0A6YYG2 114 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 IGHV3-43A0A0B4J1X8 118 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 A0A1W2PRD5 423 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 A0A1W2PRF3 423 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 A0A1W2PRM7 423 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 C17orf98A8MV24 154 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 TIMM23O14925 209 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 BET1O15155 118 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 TPPPO94811 219 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 IGHV3-43DP0DP04 118 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 PTHLHP12272 177 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 IL3RAP26951 378 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 RCVRNP35243 200 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 OR3A3P47888 321 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 GNG10P50151 68 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 RAG2P55895 527 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 PAX2Q02962 417 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 KLRD1Q13241 179 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 HMGN3Q15651 99 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 DEFB112Q30KQ8 113 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 STEAP3Q658P3 488 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 C1orf122Q6ZSJ8 110 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 TCF23Q7RTU1 214 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 PNKDQ8N490 385 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 BEST4Q8NFU0 473 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 OR10A7Q8NGE5 316 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 OR10V1Q8NGI7 309 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 OR4A4PQ8NGN8 299 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 OR6Q1Q8NGQ2 317 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 OR4F5Q8NH21 305 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 UPRTQ96BW1 309 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 KIRREL1Q96J84 757 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 CLEC7AQ9BXN2 247 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 SIRPDQ9H106 197 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 TMEM133Q9H2Q1 129 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 PRDM13Q9H4Q3 707 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 TNFRSF19Q9NS68 423 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 C1RLQ9NZP8 487 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 SLC23A1Q9UHI7 598 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 ELF5Q9UKW6 265 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-218ENST00000552839 KCNK7Q9Y2U2 307 aa9.27□□□□□ -0.93
TMEM116-218ENST00000552839 AMMECR1Q9Y4X0 333 aaPredicted RBP9.27□□□□□ -0.93
TMEM116-218ENST00000552839 SULT1C2O00338 296 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 RBBP9O75884 186 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 ARG1P05089 322 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 CRYBA1P05813 215 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 CTXN2P0C2S0 81 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 ZBTB25P24278 435 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 ARHGDIBP52566 201 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 PRRX1P54821 245 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 TAS2R46P59540 309 aa9.26□□□□□ -0.93
TMEM116-218ENST00000552839 PRB3Q04118 309 aaPredicted RBP9.26□□□□□ -0.93
TMEM116-218ENST00000552839 C17orf58Q2M2W7 97 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms