RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 IGLV2-14P01704 120 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 METTL15P1P0C7V9 234 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 BCL2P10415 239 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 F2RP25116 425 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 IL2RGP31785 369 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 SSR4P51571 173 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 CARD18P57730 90 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 PCBD1P61457 104 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 C9orf135Q5VTT2 229 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 WDR25Q64LD2 544 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF324BQ6AW86 544 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 MRPL30Q8TCC3 161 aaKnown RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 MBD3L1Q8WWY6 194 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 S100PBPQ96BU1 408 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 RCC1LQ96I51 464 aaKnown RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ADGRG7Q96K78 797 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 C1QTNF5Q9BXJ0 243 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 PRRG4Q9BZD6 226 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 PIGBOS1A0A0B4J2F0 54 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 KIR2DS1A0A191URI9 304 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 LILRA1O75019 489 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 IFNA10P01566 189 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 IGKV1D-33P01593 117 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 IGKV1-33P01594 117 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 IGKV1-5P01602 117 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 OPN1MWP04001 364 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 OPN1MW2P0DN77 364 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 OPN1MW3P0DN78 364 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 SLC25A6P12236 298 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 CCNOP22674 350 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 KIR2DS4P43632 304 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 FGF12P61328 243 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 PKIAP61925 76 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 PRDX4Q13162 271 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 HNF4GQ14541 408 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 KIR2DS1Q14954 304 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 COL19A1Q14993 1142 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ACSF3Q4G176 576 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ABLIM2Q6H8Q1 611 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 SLC25A24Q6NUK1 477 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 COLCA1Q6ZS62 124 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 RPS19BP1Q86WX3 136 aaKnown RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF525Q8N782 197 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 OR1K1Q8NGR3 316 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 OR4X1Q8NH49 305 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 OR10D3Q8NH80 312 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 OR2V1Q8NHB1 315 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 UBALD1Q8TB05 177 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 GTF3AQ92664 365 aaKnown RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 PACRGQ96M98 296 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 RAB40CQ96S21 281 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 P2RX4Q99571 388 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 CTDSP1Q9GZU7 261 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ZNF552Q9H707 407 aaPredicted RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 WDR54Q9H977 334 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 CDH20Q9HBT6 801 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 RNF150Q9ULK6 438 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 ATP23Q9Y6H3 246 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 TNRC6BQ9UPQ9 1833 aaKnown RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 NBEAQ8NFP9 2946 aa4.61□□□□□ -1.67
LIMA1-212ENST00000552491 URB1O60287 2271 aaKnown RBP4.61□□□□□ -1.67
LIMA1-212ENST00000552491 A0A096LPE4 126 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 A0A1W2PPZ6 126 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 PINLYPA6NC86 204 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 LRRC3CA6NJW4 275 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 HS3ST1O14792 307 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 NGFP01138 241 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 CCL4P13236 92 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 SELLP14151 372 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 GZMHP20718 246 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 EPHA8P29322 1005 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-212ENST00000552491 DDTP30046 118 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 MLF1P58340 268 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 CLN3Q13286 438 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 PRSS8Q16651 343 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 HLA-BQ31612 363 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 WIPI1Q5MNZ9 446 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-212ENST00000552491 RIPPLY2Q5TAB7 128 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 DBX2Q6ZNG2 339 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 REC114Q7Z4M0 266 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 SAXO1Q8IYX7 474 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 NEK7Q8TDX7 302 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 RDH5Q92781 318 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 PRDM14Q9GZV8 571 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 RBKSQ9H477 322 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 DEPPQ9NTK1 212 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 OR1A1Q9P1Q5 309 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 CACNG5Q9UF02 275 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 ERRFI1Q9UJM3 462 aaPredicted RBP4.6□□□□□ -1.67
LIMA1-212ENST00000552491 PITPNC1Q9UKF7 332 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 PCSK5Q92824 1860 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 A0A087X0M5 115 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 TRAV24A0A0B4J272 114 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 A0A1B0GX30 115 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 CEBPZOSA8MTT3 80 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 C9J4A7 227 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 TSTD3H0UI37 97 aa4.6□□□□□ -1.67
LIMA1-212ENST00000552491 HMGB3O15347 200 aaKnown RBP4.6□□□□□ -1.67
LIMA1-212ENST00000552491 AMBPP02760 352 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms