RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 WIPF2Q8TF74 440 aaPredicted RBP11.22□□□□□ -0.61
DDX54-210ENST00000552375 CREB3L1Q96BA8 519 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 ARHGAP5-AS1Q96IT6 56 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 CENPOQ9BU64 300 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 PECRQ9BY49 303 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 TAF9BQ9HBM6 251 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 PLEKHJ1Q9NW61 149 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 GFOD1Q9NXC2 390 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 GNG12Q9UBI6 72 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 AK3Q9UIJ7 227 aa11.22□□□□□ -0.61
DDX54-210ENST00000552375 AMMECR1Q9Y4X0 333 aaPredicted RBP11.22□□□□□ -0.61
DDX54-210ENST00000552375 LDLRAD4O15165 306 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 SPINT2O43291 252 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 ORC5O43913 435 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 FBXO24O75426 580 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 GALP22466 123 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 FGF9P31371 208 aaPredicted RBP11.21□□□□□ -0.61
DDX54-210ENST00000552375 SDC2P34741 201 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 CEACAM3P40198 252 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 REG1BP48304 166 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 MOGAT2Q3SYC2 334 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 HIST2H2BDQ6DRA6 164 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 OR52L2PQ8NGH6 319 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 RPEQ96AT9 228 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 AKR1E2Q96JD6 320 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 WNT10AQ9GZT5 417 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 LINC00574Q9H8X3 128 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 VCX3AQ9NNX9 186 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 DAPK2Q9UIK4 370 aa11.21□□□□□ -0.61
DDX54-210ENST00000552375 NOTCH3Q9UM47 2321 aa11.21□□□□□ -0.62
DDX54-210ENST00000552375 TGP01266 2768 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 TET2Q6N021 2002 aaPredicted RBP11.2□□□□□ -0.62
DDX54-210ENST00000552375 FOXI3A8MTJ6 420 aaPredicted RBP11.2□□□□□ -0.62
DDX54-210ENST00000552375 H3BUI4 141 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 OPN1MWP04001 364 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 GLAP06280 429 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 OPN1MW2P0DN77 364 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 OPN1MW3P0DN78 364 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 SNRPBP14678 240 aaKnown RBP11.2□□□□□ -0.62
DDX54-210ENST00000552375 GZMHP20718 246 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 BRS3P32247 399 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 PPP1CCP36873 323 aaKnown RBP11.2□□□□□ -0.62
DDX54-210ENST00000552375 VDAC2P45880 294 aaPredicted RBP11.2□□□□□ -0.62
DDX54-210ENST00000552375 PSMD7P51665 324 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 LOXL3P58215 753 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 LSM3P62310 102 aaKnown RBP11.2□□□□□ -0.62
DDX54-210ENST00000552375 BLCAPP62952 87 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 TMEM95Q3KNT9 176 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 CCDC144NLQ6NUI1 221 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 GAPTQ8N292 157 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 OR10A7Q8NGE5 316 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 OR56B4Q8NH76 319 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 RBMXL1Q96E39 390 aaKnown RBP11.2□□□□□ -0.62
DDX54-210ENST00000552375 KCTD7Q96MP8 289 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 KCNIP1Q9NZI2 227 aa11.2□□□□□ -0.62
DDX54-210ENST00000552375 NOTOA8MTQ0 251 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 OOSP1A8MZH6 123 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 LY6LH3BQJ8 138 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 HSD17B6O14756 317 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 PEX14O75381 377 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 CA11O75493 328 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 SMIM18P0DKX4 95 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 TMEM50BP56557 158 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 MADCAM1Q13477 382 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 HMGN3Q15651 99 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 ARSJQ5FYB0 599 aaPredicted RBP11.19□□□□□ -0.62
DDX54-210ENST00000552375 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 SFXN4Q6P4A7 337 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 Q6ZS46 218 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 OR56B1Q8NGI3 324 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 LGALS14Q8TCE9 139 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 CAPSLQ8WWF8 208 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 IL1F10Q8WWZ1 152 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 OR2S2Q9NQN1 319 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 MBNL3Q9NUK0 354 aaKnown RBP11.19□□□□□ -0.62
DDX54-210ENST00000552375 RAB22AQ9UL26 194 aa11.19□□□□□ -0.62
DDX54-210ENST00000552375 IGHV3-72A0A0B4J1Y9 119 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 A0A1W2PPI3 338 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 SH2D7A6NKC9 451 aaPredicted RBP11.18□□□□□ -0.62
DDX54-210ENST00000552375 OR2F2O95006 317 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 NAPSAO96009 420 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 CD28P10747 220 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 MNDAP41218 407 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 C1QL4Q86Z23 238 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 FAM89BQ8N5H3 189 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 DRAM1Q8N682 238 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 OR52M1Q8NGK5 317 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 MAFIPQ8WZ33 124 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 YIPF6Q96EC8 236 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 CMSS1Q9BQ75 279 aaKnown RBP11.18□□□□□ -0.62
DDX54-210ENST00000552375 OCSTAMPQ9BR26 566 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 SLC25A33Q9BSK2 321 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 ATG5Q9H1Y0 275 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 RAB9BQ9NP90 201 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 DNAH3Q8TD57 4116 aa11.18□□□□□ -0.62
DDX54-210ENST00000552375 AIREO43918 545 aa11.17□□□□□ -0.62
DDX54-210ENST00000552375 SNRNP70P08621 437 aaKnown RBP11.17□□□□□ -0.62
DDX54-210ENST00000552375 GNB3P16520 340 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms