RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SMIM8Q96KF7 97 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 KCNS2Q9ULS6 477 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 BOD1L1Q8NFC6 3051 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 IGLV3-9A0A075B6K5 115 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 BORCS7-ASMTA0A0B4J1R7 106 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 NUDT19A8MXV4 375 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 SRRM5B3KS81 715 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 FBXO24O75426 580 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 HBZP02008 142 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 PRDX2P32119 198 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 NHLH2Q02577 135 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 KRBOX4Q5JUW0 171 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 VHLLQ6RSH7 139 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 C22orf34Q6ZV56 151 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 OR2C3Q8N628 320 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 BPIFCQ8NFQ6 507 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 ARL11Q969Q4 196 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 TOLLIPQ9H0E2 274 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 PLA2G2EQ9NZK7 142 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 ANKRD11Q6UB99 2663 aaPredicted RBP11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 A0A0G2JNJ9 132 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 A0A1B0GU03 582 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 ATP6V1G2-DDX39BF2Z307 99 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 SLC25A6P12236 298 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 MMP9P14780 707 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 EGR1P18146 543 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 IL2RGP31785 369 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 GABRA2P47869 451 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 GLIPR1P48060 266 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 MRGPRGQ86SM5 289 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 FAM90A1Q86YD7 464 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 DRAM1Q8N682 238 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 GPR146Q96CH1 333 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 MEGF10Q96KG7 1140 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 LURAP1Q96LR2 239 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 OR2V2Q96R30 315 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 MAGT1Q9H0U3 335 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 PLEKHF2Q9H8W4 249 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 SEBOXQ9HB31 216 aaPredicted RBP11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 Q9UFV3 132 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 LAMA5O15230 3695 aa11.75□□□□□ -0.53
RAB3IP-216ENST00000552199 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 FAM24AA6NFZ4 105 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 SSSCA1O60232 199 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 PITX3O75364 302 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 M6PRP20645 277 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 RPS23P62266 143 aaKnown RBP11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 EWSR1Q01844 656 aaKnown RBP eCLIP11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 PAX5Q02548 391 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 SPRNQ5BIV9 151 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 GFRALQ6UXV0 394 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 OR52L2PQ8NGH6 319 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 MRGPRDQ8TDS7 321 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 GINS3Q9BRX5 216 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 MMP26Q9NRE1 261 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 LIN7CQ9NUP9 197 aaKnown RBP11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 APC2O95996 2303 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 IGKV1D-17A0A075B6S4 117 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 IGSF23A1L1A6 192 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 CD40P25942 277 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 VAMP2P63027 116 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 BLOC1S1P78537 153 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 ZNF585BQ52M93 769 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 PXDC1Q5TGL8 231 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 GCSAMQ8N6F7 178 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 ZNF645Q8N7E2 425 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 ZBTB34Q8NCN2 500 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 SUN5Q8TC36 379 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 LSM10Q969L4 123 aaKnown RBP11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 SLC25A31Q9H0C2 315 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 LYRM2Q9NU23 88 aaPredicted RBP11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 ELOVL5Q9NYP7 299 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 ZNF835Q9Y2P0 537 aa11.74□□□□□ -0.53
RAB3IP-216ENST00000552199 CADP27708 2225 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 SPTBN2O15020 2390 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 RNF212BA8MTL3 300 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 DLL1O00548 723 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 SPRY3O43610 288 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 ZNF737O75373 536 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 MED6O75586 246 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 CCKARP32238 428 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 LPAR6P43657 344 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 CAV2P51636 162 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 IL34Q6ZMJ4 242 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 MOGAT3Q86VF5 341 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 TPRX1Q8N7U7 411 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 MRPL37Q9BZE1 423 aaKnown RBP11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 TMA7Q9Y2S6 64 aaKnown RBP11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 DCHS1Q96JQ0 3298 aa11.73□□□□□ -0.53
RAB3IP-216ENST00000552199 C16orf97H3BN30 126 aa11.72□□□□□ -0.53
RAB3IP-216ENST00000552199 CHST1O43916 411 aa11.72□□□□□ -0.53
RAB3IP-216ENST00000552199 LHBP01229 141 aa11.72□□□□□ -0.53
RAB3IP-216ENST00000552199 ZNF16P17020 682 aaPredicted RBP11.72□□□□□ -0.53
RAB3IP-216ENST00000552199 EPHA1P21709 976 aa11.72□□□□□ -0.53
RAB3IP-216ENST00000552199 SELENOVP59797 346 aa11.72□□□□□ -0.53
RAB3IP-216ENST00000552199 PJVKQ0ZLH3 352 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms