RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 C15orf32Q32M92 178 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 TTLL9Q3SXZ7 439 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 C14orf177Q52M58 125 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 SPRNQ5BIV9 151 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 TCTEX1D4Q5JR98 221 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 CTRB2Q6GPI1 263 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 DEGS2Q6QHC5 323 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 C6orf89Q6UWU4 347 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 ZNF621Q6ZSS3 439 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 OR2W3Q7Z3T1 314 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 TMEM61Q8N0U2 210 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 KIR2DL5AQ8N109 375 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 CD177Q8N6Q3 437 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 C14orf178Q8N769 122 aaPredicted RBP2.75□□□□□ -1.97
LIMA1-208ENST00000551691 FAM86B1Q8N7N1 296 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 OR2G3Q8NGZ4 309 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 KIR2DL5BQ8NHK3 375 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 LRRC29Q8WV35 223 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 TSPAN32Q96QS1 320 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 RASL11BQ9BPW5 248 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 CHID1Q9BWS9 393 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 GABARAPL3Q9BY60 117 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 NAA50Q9GZZ1 169 aaKnown RBP2.75□□□□□ -1.97
LIMA1-208ENST00000551691 MAT2BQ9NZL9 334 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 XCL2Q9UBD3 114 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 NUFIP1Q9UHK0 495 aaKnown RBP2.75□□□□□ -1.97
LIMA1-208ENST00000551691 ZNF229Q9UJW7 825 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 RBMX2Q9Y388 322 aaKnown RBP2.75□□□□□ -1.97
LIMA1-208ENST00000551691 V9GYY9 64 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 TRAV39A0A0B4J263 110 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 A0A1B0GVI7 797 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 ISPDA4D126 451 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 PRSS37A4D1T9 235 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 PSMB11A5LHX3 300 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 ZNF726A6NNF4 738 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 ZNF99A8MXY4 864 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-208ENST00000551691 ACOX3O15254 700 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 SLC31A2O15432 143 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 ENTPD5O75356 428 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 RAB3DO95716 219 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 LY6G6CO95867 125 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 HPRT1P00492 218 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 IGHV3-23P01764 117 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 FABP3P05413 133 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 KLK1P06870 262 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 C8GP07360 202 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 GFAPP14136 432 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 CSNK2A2P19784 350 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-208ENST00000551691 RAB5AP20339 215 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 IL12BP29460 328 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 RANBP1P43487 201 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 CDKN2DP55273 166 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 EGFEM1PQ0D2K5 195 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 BIKQ13323 160 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 QPRTQ15274 297 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 TOMM34Q15785 309 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-208ENST00000551691 ATP6V1FQ16864 119 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 PLPPR5Q32ZL2 321 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 TSPO2Q5TGU0 170 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 CGB2Q6NT52 195 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 TMPRSS11AQ6ZMR5 421 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 MBOAT2Q6ZWT7 520 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 PDZD9Q8IXQ8 264 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 SPAG16Q8N0X2 631 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 NKAPP1Q8N9T2 125 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 OR7G1Q8NGA0 311 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 OR4S1Q8NGB4 309 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 OR10G9Q8NGN4 311 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 OR6Q1Q8NGQ2 317 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 OR6N2Q8NGY6 317 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 ZFP90Q8TF47 636 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 CCL17Q92583 94 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 RCN3Q96D15 328 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 NRBF2Q96F24 287 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 SCGB3A2Q96PL1 93 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 TRNT1Q96Q11 434 aaKnown RBP2.74□□□□□ -1.97
LIMA1-208ENST00000551691 MS4A8Q9BY19 250 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 CENPHQ9H3R5 247 aa2.74□□□□□ -1.97
LIMA1-208ENST00000551691 PAQR5Q9NXK6 330 aaPredicted RBP2.74□□□□□ -1.97
LIMA1-208ENST00000551691 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
LIMA1-208ENST00000551691 IGHV2OR16-5A0A0B4J2B6 119 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 SEC14L6B5MCN3 397 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 H3BN98 237 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 H7C2Y5 167 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 APOC4-APOC2K7ER74 178 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 M0R233 179 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 FOXH1O75593 365 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 UTS2O95399 124 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 IGKV1D-16P01601 117 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 IGHMP01871 453 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 APOC2P02655 101 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 HSPB1P04792 205 aaKnown RBP2.73□□□□□ -1.97
LIMA1-208ENST00000551691 OR8U9P0C7N5 309 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 CCL2P13500 99 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 TCP1P17987 556 aaKnown RBP2.73□□□□□ -1.97
LIMA1-208ENST00000551691 HTR2CP28335 458 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 MAS1LP35410 378 aa2.73□□□□□ -1.97
LIMA1-208ENST00000551691 CEACAM3P40198 252 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms