RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 RHOFQ9HBH0 211 aa10.8□□□□□ -0.68
VPS29-209ENST00000551655 CLN6Q9NWW5 311 aa10.8□□□□□ -0.68
VPS29-209ENST00000551655 XRCC3O43542 346 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 PRKYO43930 277 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 OSMP13725 252 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 GZMHP20718 246 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 FASP25445 335 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 LPCAT4Q643R3 524 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 LINC00336Q6ZUF6 198 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 ZNF575Q86XF7 245 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 PRR18Q8N4B5 295 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 CCDC54Q8NEL0 328 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 OR51A4Q8NGJ6 313 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 WDR89Q96FK6 387 aaPredicted RBP10.79□□□□□ -0.68
VPS29-209ENST00000551655 GNG12Q9UBI6 72 aa10.79□□□□□ -0.68
VPS29-209ENST00000551655 TCRBV5S2A0A599 114 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 TMEM30CPA0ZSE6 113 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 NDUFB8O95169 186 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 UBCP0CG48 685 aaKnown RBP10.78□□□□□ -0.68
VPS29-209ENST00000551655 TMEM267Q0VDI3 215 aaPredicted RBP10.78□□□□□ -0.68
VPS29-209ENST00000551655 GNMTQ14749 295 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 PLGLAQ15195 96 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 DEFB135Q30KP9 77 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 C5orf24Q7Z6I8 188 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 LAX1Q8IWV1 398 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 ODF3L1Q8IXM7 274 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 OR5T1Q8NG75 326 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 OR2K2Q8NGT1 345 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 OR1L1Q8NH94 360 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 DHDHQ9UQ10 334 aa10.78□□□□□ -0.68
VPS29-209ENST00000551655 A0A1W2PQL4 384 aaPredicted RBP10.77□□□□□ -0.69
VPS29-209ENST00000551655 METTL15A6NJ78 407 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 RRHO14718 337 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 PRKACGP22612 351 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 OR3A3P47888 321 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 KCNJ3P48549 501 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 ADARB1P78563 741 aaKnown RBP10.77□□□□□ -0.69
VPS29-209ENST00000551655 IL13RA2Q14627 380 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 AKIRIN2Q53H80 203 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 FAM131AQ6UXB0 335 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 WFDC3Q8IUB2 231 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 RNF150Q9ULK6 438 aa10.77□□□□□ -0.69
VPS29-209ENST00000551655 LOC102724200A0A096LPH7 203 aaPredicted RBP10.76□□□□□ -0.69
VPS29-209ENST00000551655 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 HMGB1P1B2RPK0 211 aaPredicted RBP10.76□□□□□ -0.69
VPS29-209ENST00000551655 ORC5O43913 435 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 MT-ND2P03891 347 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 DBTP11182 482 aaKnown RBP10.76□□□□□ -0.69
VPS29-209ENST00000551655 CD40LGP29965 261 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 KISS1Q15726 138 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 RPEL1Q2QD12 228 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 DEFB114Q30KQ6 69 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 TP53I3Q53FA7 332 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 ELP2Q6IA86 826 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 POC5Q8NA72 575 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 DYNLRB2Q8TF09 96 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 CYYR1Q96J86 154 aa10.76□□□□□ -0.69
VPS29-209ENST00000551655 PEF1Q9UBV8 284 aaKnown RBP10.76□□□□□ -0.69
VPS29-209ENST00000551655 SPRY2O43597 315 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 CCDC22O60826 627 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 RBMXL2O75526 392 aaKnown RBP10.75□□□□□ -0.69
VPS29-209ENST00000551655 OR7C1O76099 320 aaPredicted RBP10.75□□□□□ -0.69
VPS29-209ENST00000551655 OR2A4O95047 310 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 CA2P00918 260 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 ZNF45Q02386 682 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 TRIM25Q14258 630 aaKnown RBP10.75□□□□□ -0.69
VPS29-209ENST00000551655 Q3ZCU0 254 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 ZNF691Q5VV52 312 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 GRPEL2Q8TAA5 225 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 GNG8Q9UK08 70 aa10.75□□□□□ -0.69
VPS29-209ENST00000551655 AIPO00170 330 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 GABRPO00591 440 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 RTL8CO15255 209 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 HTR3BO95264 441 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 HBZP02008 142 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 MT-ND4P03905 459 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 BMI1P35226 326 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 NANOS2P60321 138 aaKnown RBP10.74□□□□□ -0.69
VPS29-209ENST00000551655 NANOS3P60323 173 aaKnown RBP10.74□□□□□ -0.69
VPS29-209ENST00000551655 TATDN3Q17R31 274 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 AADACL4Q5VUY2 407 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 GLDNQ6ZMI3 551 aaPredicted RBP10.74□□□□□ -0.69
VPS29-209ENST00000551655 BVESQ8NE79 360 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 OR52L2PQ8NGH6 319 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 OR13C3Q8NGS6 347 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 OR2G2Q8NGZ5 317 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 OR4K15Q8NH41 348 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 CMTM5Q96DZ9 223 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 MAGIXQ9H6Y5 334 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 FRRS1LQ9P0K9 344 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 PEMTQ9UBM1 199 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 FBXL17Q9UF56 701 aa10.74□□□□□ -0.69
VPS29-209ENST00000551655 GEMIN2O14893 280 aaKnown RBP10.73□□□□□ -0.69
VPS29-209ENST00000551655 MAGEB3O15480 346 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 PPP1CCP36873 323 aaKnown RBP10.73□□□□□ -0.69
VPS29-209ENST00000551655 MOGAT2Q3SYC2 334 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 ATAD3CQ5T2N8 411 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 ZNF343Q6P1L6 599 aa10.73□□□□□ -0.69
VPS29-209ENST00000551655 ZNF497Q6ZNH5 498 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms