RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 CST11Q9H112 138 aa5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 ELL3Q9HB65 397 aaPredicted RBP5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 TMEM165Q9HC07 324 aa5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 RBFOX1Q9NWB1 397 aaKnown RBP5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 CCDC59Q9P031 241 aaKnown RBP5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 ABRACLQ9P1F3 81 aa5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 NLKQ9UBE8 527 aa5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 KAAG1Q9UBP8 84 aa5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 DAPK2Q9UIK4 370 aa5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 WIPI2Q9Y4P8 454 aa5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 ETV7Q9Y603 341 aa5.25□□□□□ -1.57
DEPDC4-210ENST00000551642 PKHD1P08F94 4074 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 IGKV1D-17A0A075B6S4 117 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 TMEM272A0A1B0GTI8 110 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 A0A1B0GUS0 222 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 A0A1W2PP11 408 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 CLPSL1A2RUU4 121 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A18PA6NE21 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A16PA6NEW6 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A20PA6NIJ5 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A7PA6NKC0 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A22PA8MWA6 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A12PA8MX19 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A5PA8MXJ8 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A23PA8MXZ1 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 CRTAPO75718 401 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A15PP0C7V4 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM90A14PP0C7W9 464 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 PSG2P11465 335 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 MGMTP16455 207 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 ZNF182P17025 639 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 PRKACAP17612 351 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 SERPINA2P20848 420 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 PRDX2P32119 198 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 CD80P33681 288 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 RAG2P55895 527 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 CLDN12P56749 244 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 RBM11P57052 281 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 RPS27AP62979 156 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 UNC119Q13432 240 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 IL13RA2Q14627 380 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 P2RY14Q15391 338 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 MPV17LQ2QL34 196 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM201AQ5SY85 155 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 IDNKQ5T6J7 187 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 CCDC144NLQ6NUI1 221 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 ZNF561Q8N587 486 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 FAM89BQ8N5H3 189 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 SPICQ8N5J4 248 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 TMEM104Q8NE00 496 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 OR10K1Q8NGX5 313 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 ANGPTL6Q8NI99 470 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 MUC7Q8TAX7 377 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 NANPQ8TBE9 248 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 AP3S1Q92572 193 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 PHF21AQ96BD5 680 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 SEH1LQ96EE3 360 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 SDSLQ96GA7 329 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 CMTM3Q96MX0 182 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 B9D2Q9BPU9 175 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 TMEM246Q9BRR3 403 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 URM1Q9BTM9 101 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 TM2D1Q9BX74 207 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 TMEM59Q9BXS4 323 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 NXF2Q9GZY0 626 aaKnown RBP5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 NARFLQ9H6Q4 476 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 BEX1Q9HBH7 125 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 ZNF69Q9UC07 566 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 OR5V1Q9UGF6 321 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 GLS2Q9UI32 602 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 ZNF222Q9UK12 451 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 RAB22AQ9UL26 194 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 SPATA2Q9UM82 520 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 ST3GAL6Q9Y274 331 aa5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 SOX21Q9Y651 276 aaPredicted RBP5.24□□□□□ -1.57
DEPDC4-210ENST00000551642 A0A075B6Q4 140 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 IGHV3OR15-7A0A075B7D8 119 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 A0A0A6YYH2 397 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 A0A0B4J203 849 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 WI2-2373I1.2A0A1W2PRP0 233 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 NKX6-3A6NJ46 265 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 A6NJ64 397 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 RFPL4AA6NLU0 287 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 CEACAM18A8MTB9 384 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 F5H0A9 414 aaPredicted RBP5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 RFPL4AL1F8VTS6 287 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 SH2D1BO14796 132 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 GEMIN2O14893 280 aaKnown RBP5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 SIGLEC5O15389 551 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 CLPXO76031 633 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 HAND1O96004 215 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 PAHP00439 452 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 GYPAP02724 150 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 WNT2P09544 360 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 CSF1P09603 554 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 NPY4RP50391 375 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 GMFBP60983 142 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 LMO4P61968 165 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 PIGYQ3MUY2 71 aa5.23□□□□□ -1.57
DEPDC4-210ENST00000551642 AVPI1Q5T686 147 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms