RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 MBD2Q9UBB5 411 aa16.4■□□□□ 0.22
SSH1-209ENST00000551165 ODAMA1E959 279 aa16.4■□□□□ 0.22
SSH1-209ENST00000551165 C18orf12Q96KH6 178 aa16.4■□□□□ 0.22
SSH1-209ENST00000551165 RNF126Q9BV68 326 aa16.4■□□□□ 0.22
SSH1-209ENST00000551165 C15orf65H3BRN8 121 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 MGST3O14880 152 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 CFDP00746 253 aaPredicted RBP16.39■□□□□ 0.21
SSH1-209ENST00000551165 IRF2P14316 349 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 PSMB6P28072 239 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 PPP1CCP36873 323 aaKnown RBP16.39■□□□□ 0.21
SSH1-209ENST00000551165 IL15RAQ13261 267 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 OPCMLQ14982 345 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 SLC7A5P1Q8MH63 180 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 SUCNR1Q9BXA5 334 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 DNTTIP1Q9H147 329 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 RNF150Q9ULK6 438 aa16.39■□□□□ 0.21
SSH1-209ENST00000551165 LUMP51884 338 aaPredicted RBP16.38■□□□□ 0.21
SSH1-209ENST00000551165 RND3P61587 244 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 IAH1Q2TAA2 248 aaPredicted RBP16.38■□□□□ 0.21
SSH1-209ENST00000551165 FAM209AQ5JX71 171 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 SDSLQ96GA7 329 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 C2orf50Q96LR7 162 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 MFFQ9GZY8 342 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 SEBOXQ9HB31 216 aaPredicted RBP16.38■□□□□ 0.21
SSH1-209ENST00000551165 PAX5Q02548 391 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 FGL1Q08830 312 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 RAB32Q13637 225 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 EFNB3Q15768 340 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 ZNF672Q499Z4 452 aaPredicted RBP16.38■□□□□ 0.21
SSH1-209ENST00000551165 UTF1Q5T230 341 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 TMUB2Q71RG4 321 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 BVESQ8NE79 360 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 OR8H1Q8NGG4 311 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 ITLN2Q8WWU7 325 aaPredicted RBP16.38■□□□□ 0.21
SSH1-209ENST00000551165 LRRC46Q96FV0 321 aa16.38■□□□□ 0.21
SSH1-209ENST00000551165 RBM7Q9Y580 266 aaKnown RBP16.38■□□□□ 0.21
SSH1-209ENST00000551165 ATP6V1G1O75348 118 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 SLC25A4P12235 298 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 OMGP23515 440 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 SWI5Q1ZZU3 235 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 C4orf17Q53FE4 359 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 TEX36Q5VZQ5 186 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 ZNF788Q6ZQV5 615 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 FAM185AQ8N0U4 392 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 MUC15Q8N387 334 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 SLC35G3Q8N808 338 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 LRTM2Q8N967 370 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 OR51H1Q8NH63 302 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 LURAP1Q96LR2 239 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 EGLN1Q9GZT9 426 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 TMEM222Q9H0R3 208 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 OR5AC2Q9NZP5 309 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 ZFYVE26Q68DK2 2539 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 B9A039 149 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 FCN3O75636 299 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 P2RX3P56373 397 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 C6orf183Q5T699 404 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 TMEM268Q5VZI3 342 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 C5orf30Q96GV9 206 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 ARL6Q9H0F7 186 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 OR2S2Q9NQN1 319 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 KCNS2Q9ULS6 477 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 TNFSF18Q9UNG2 199 aa16.37■□□□□ 0.21
SSH1-209ENST00000551165 UBE2J1Q9Y385 318 aaPredicted RBP16.37■□□□□ 0.21
SSH1-209ENST00000551165 RNF222A6NCQ9 220 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 TMEM178BH3BS89 294 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 FOXRED2Q8IWF2 684 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 CMTM1Q8IZ96 169 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 LGI3Q8N145 548 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 ZNF561Q8N587 486 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 TMEM204Q9BSN7 226 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 MS4A5Q9H3V2 200 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 LYNX1G3V0Z9 82 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 IGHV3-7P01780 117 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 LYNX1P0DP58 116 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 RPA2P15927 270 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 S100A11P31949 105 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 TEX261Q6UWH6 196 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 PPP1R35Q8TAP8 253 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 THAP6Q8TBB0 222 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 TMEM106BQ9NUM4 274 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 U3KQ87 197 aa16.36■□□□□ 0.21
SSH1-209ENST00000551165 MUC1P15941 1255 aaPredicted RBP16.35■□□□□ 0.21
SSH1-209ENST00000551165 CYCSP99999 105 aaKnown RBP16.35■□□□□ 0.21
SSH1-209ENST00000551165 TMEM65Q6PI78 240 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 DRAM1Q8N682 238 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 RRNAD1Q96FB5 475 aaKnown RBP16.35■□□□□ 0.21
SSH1-209ENST00000551165 ZNF665Q9H7R5 613 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 DSCAML1Q8TD84 2053 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 LRRC30A6NM36 301 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 TMPRSS2O15393 492 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 F2RP25116 425 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 TCF23Q7RTU1 214 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 SELENOHQ8IZQ5 122 aaKnown RBP16.35■□□□□ 0.21
SSH1-209ENST00000551165 GALNT11Q8NCW6 608 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 OR52M1Q8NGK5 317 aa16.35■□□□□ 0.21
SSH1-209ENST00000551165 VRK1Q99986 396 aaPredicted RBP16.35■□□□□ 0.21
SSH1-209ENST00000551165 C19orf84I3L1E1 186 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 CLDN14O95500 239 aa16.34■□□□□ 0.21
SSH1-209ENST00000551165 IFNA21P01568 189 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms