RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 FGF16O43320 207 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 RPLP1P05386 114 aaKnown RBP12.51□□□□□ -0.41
COX6A1-203ENST00000550009 CD1AP06126 327 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 FUT3P21217 361 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 HTR2CP28335 458 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 GPR12P47775 334 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 OR3A3P47888 321 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 GPR176Q14439 515 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 IRF3Q14653 427 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 DEFB136Q30KP8 78 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 MORN2Q502X0 79 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 C6orf201Q7Z4U5 140 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 TMEM203Q969S6 136 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 GNG12Q9UBI6 72 aa12.51□□□□□ -0.41
COX6A1-203ENST00000550009 PDCD6O75340 191 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 SLC2A2P11168 524 aaPredicted RBP12.5□□□□□ -0.41
COX6A1-203ENST00000550009 CHATP28329 748 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 THBS3P49746 956 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 RPS25P62851 125 aaKnown RBP12.5□□□□□ -0.41
COX6A1-203ENST00000550009 QRFPP83859 136 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 PLA2G7Q13093 441 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 GPR50Q13585 617 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 RBM48Q5RL73 367 aaKnown RBP12.5□□□□□ -0.41
COX6A1-203ENST00000550009 LIPKQ5VXJ0 399 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 TMEM91Q6ZNR0 172 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 CEACAM19Q7Z692 300 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 C8orf31Q8N9H6 132 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 KLHL30-AS1Q8NEE0 82 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 OR2T10Q8NGZ9 312 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 S1PR3Q99500 378 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 HDHD3Q9BSH5 251 aaPredicted RBP12.5□□□□□ -0.41
COX6A1-203ENST00000550009 ABCG5Q9H222 651 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 OR2S2Q9NQN1 319 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 MBNL3Q9NUK0 354 aaKnown RBP12.5□□□□□ -0.41
COX6A1-203ENST00000550009 ERGIC3Q9Y282 383 aa12.5□□□□□ -0.41
COX6A1-203ENST00000550009 H0YHG0 523 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 SPINT2O43291 252 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 MYF6P23409 242 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 CD1BP29016 333 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 MAP2K4P45985 399 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 ZNF137PP52743 207 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 LSAMPQ13449 338 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 P2RY14Q15391 338 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 MED22Q15528 200 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 C1orf100Q5SVJ3 147 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 TGIF2LXQ8IUE1 241 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 CDH26Q8IXH8 852 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 FAM71E2Q8N5Q1 922 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 CHPT1Q8WUD6 406 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 MRPS24Q96EL2 167 aaKnown RBP12.49□□□□□ -0.41
COX6A1-203ENST00000550009 RAX2Q96IS3 184 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 UQCC2Q9BRT2 126 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 MRPL20Q9BYC9 149 aaKnown RBP12.49□□□□□ -0.41
COX6A1-203ENST00000550009 SPACA1Q9HBV2 294 aa12.49□□□□□ -0.41
COX6A1-203ENST00000550009 MOSP00540 346 aa12.48□□□□□ -0.41
COX6A1-203ENST00000550009 RPS27AP62979 156 aaKnown RBP12.48□□□□□ -0.41
COX6A1-203ENST00000550009 SLC35A2P78381 396 aa12.48□□□□□ -0.41
COX6A1-203ENST00000550009 SPHARQ15513 63 aa12.48□□□□□ -0.41
COX6A1-203ENST00000550009 C6orf183Q5T699 404 aa12.48□□□□□ -0.41
COX6A1-203ENST00000550009 NKAIN3Q8N8D7 197 aa12.48□□□□□ -0.41
COX6A1-203ENST00000550009 MND1Q9BWT6 205 aa12.48□□□□□ -0.41
COX6A1-203ENST00000550009 FAM90A10PA6NDY2 464 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 FAM90A7PA6NKC0 464 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 TMEM14DPA8MWL7 114 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 NUDT19A8MXV4 375 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 FAM90A23PA8MXZ1 464 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 SOCS1O15524 211 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 SRMP19623 302 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 CLDN12P56749 244 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 CFHR3Q02985 330 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 HMGN3Q15651 99 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 RNLSQ5VYX0 342 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 REC114Q7Z4M0 266 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 P2RX4Q99571 388 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 NABP2Q9BQ15 211 aa12.47□□□□□ -0.41
COX6A1-203ENST00000550009 LIN7CQ9NUP9 197 aaKnown RBP12.47□□□□□ -0.41
COX6A1-203ENST00000550009 AK6Q9Y3D8 172 aaKnown RBP12.47□□□□□ -0.41
COX6A1-203ENST00000550009 HUWE1Q7Z6Z7 4374 aaKnown RBP12.46□□□□□ -0.41
COX6A1-203ENST00000550009 G3V318 75 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 SLC22A1O15245 554 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 ST8SIA5O15466 376 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 UCHL1P09936 223 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 HSMCR30P0CW71 290 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 CD37P11049 281 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 IL3RAP26951 378 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 MAPK3P27361 379 aaPredicted RBP12.46□□□□□ -0.41
COX6A1-203ENST00000550009 LINC00205P59089 165 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 C11orf87Q6NUJ2 197 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 RCC1LQ96I51 464 aaKnown RBP12.46□□□□□ -0.41
COX6A1-203ENST00000550009 ABHD14AQ9BUJ0 271 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 TMEM59Q9BXS4 323 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 LPAR5Q9H1C0 372 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 DCLRE1BQ9H816 532 aa12.46□□□□□ -0.41
COX6A1-203ENST00000550009 ZNF107Q9UII5 783 aaPredicted RBP12.46□□□□□ -0.41
COX6A1-203ENST00000550009 KMT2CQ8NEZ4 4911 aaKnown RBP12.46□□□□□ -0.42
COX6A1-203ENST00000550009 SAA2-SAA4A0A096LPE2 208 aa12.45□□□□□ -0.42
COX6A1-203ENST00000550009 LANCL1O43813 399 aa12.45□□□□□ -0.42
COX6A1-203ENST00000550009 SAA2P0DJI9 122 aaPredicted RBP12.45□□□□□ -0.42
COX6A1-203ENST00000550009 RAB25P57735 213 aa12.45□□□□□ -0.42
COX6A1-203ENST00000550009 EGFEM1PQ0D2K5 195 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms