RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 MRPS11P82912 194 aaKnown RBP14□□□□□ -0.17
CUX1-213ENST00000549414 ASPHD2Q6ICH7 369 aa14□□□□□ -0.17
CUX1-213ENST00000549414 COMMD1Q8N668 190 aa14□□□□□ -0.17
CUX1-213ENST00000549414 LPAR2Q9HBW0 351 aa14□□□□□ -0.17
CUX1-213ENST00000549414 DLL3Q9NYJ7 618 aa14□□□□□ -0.17
CUX1-213ENST00000549414 SYNGR3O43761 229 aa14□□□□□ -0.17
CUX1-213ENST00000549414 CSRP2Q16527 193 aa14□□□□□ -0.17
CUX1-213ENST00000549414 AWAT1Q58HT5 328 aa14□□□□□ -0.17
CUX1-213ENST00000549414 POM121L2Q96KW2 1035 aa14□□□□□ -0.17
CUX1-213ENST00000549414 DENND4CQ5VZ89 1909 aa14□□□□□ -0.17
CUX1-213ENST00000549414 GUCA2BQ16661 112 aa14□□□□□ -0.17
CUX1-213ENST00000549414 BAGE3Q86Y29 109 aa14□□□□□ -0.17
CUX1-213ENST00000549414 BAGE2Q86Y30 109 aa14□□□□□ -0.17
CUX1-213ENST00000549414 OR52M1Q8NGK5 317 aa14□□□□□ -0.17
CUX1-213ENST00000549414 ONECUT1Q9UBC0 465 aa14□□□□□ -0.17
CUX1-213ENST00000549414 LOC102723996A0A087X1L8 192 aa14□□□□□ -0.17
CUX1-213ENST00000549414 CT45A6P0DMU7 189 aa14□□□□□ -0.17
CUX1-213ENST00000549414 CT45A5P0DMU8 189 aa14□□□□□ -0.17
CUX1-213ENST00000549414 CT45A7P0DMV0 189 aa14□□□□□ -0.17
CUX1-213ENST00000549414 COL10A1Q03692 680 aa14□□□□□ -0.17
CUX1-213ENST00000549414 CT45A1Q5HYN5 189 aa14□□□□□ -0.17
CUX1-213ENST00000549414 CT45A3Q8NHU0 189 aa14□□□□□ -0.17
CUX1-213ENST00000549414 OR6C3Q9NZP0 311 aa14□□□□□ -0.17
CUX1-213ENST00000549414 TICRRQ7Z2Z1 1910 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 IGFBP7Q16270 282 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 SLC25A53Q5H9E4 307 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 DTD1Q8TEA8 209 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 ZDHHC16Q969W1 377 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 CLN8Q9UBY8 286 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 TANC1Q9C0D5 1861 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 RBFOX3A6NFN3 312 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 MSGN1A6NI15 193 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 ERVS71-1P61550 626 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 CMTM2Q8TAZ6 248 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 PRDM14Q9GZV8 571 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 PINLYPA6NC86 204 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 CRYM-AS1A6NIL9 109 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 F6UZH7 168 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 HRASP01112 189 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 ZFP36L1Q07352 338 aaKnown RBP13.99□□□□□ -0.17
CUX1-213ENST00000549414 FHL1Q13642 323 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 OR10G4Q8NGN3 311 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 OR10G9Q8NGN4 311 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 OR10G7Q8NGN6 311 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 OR1L1Q8NH94 360 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 ATP5SQ99766 215 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 IL36RNQ9UBH0 155 aa13.99□□□□□ -0.17
CUX1-213ENST00000549414 C16orf97H3BN30 126 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 OR10J4P0C629 311 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 FAM209AQ5JX71 171 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 TMEM252Q8N6L7 170 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 BORCS7Q96B45 105 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 MOB3AQ96BX8 217 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 OR51I2Q9H344 312 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 SNRPEP62304 92 aaKnown RBP13.98□□□□□ -0.17
CUX1-213ENST00000549414 ZNF90Q03938 601 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 SCNM1Q9BWG6 230 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 TNFRSF19Q9NS68 423 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 SLC2A8Q9NY64 477 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 IL36GQ9NZH8 169 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 OR1A1Q9P1Q5 309 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 HSF4Q9ULV5 492 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 V9GYS6 101 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 hCG_38984A0A1B0GV85 526 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 NHLRC3Q5JS37 347 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 PRR27Q6MZM9 219 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 PAQR4Q8N4S7 273 aaPredicted RBP13.98□□□□□ -0.17
CUX1-213ENST00000549414 ZNF561Q8N587 486 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 SLC25A28Q96A46 364 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 ZNF524Q96C55 264 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 C12orf57Q99622 126 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 TMEM222Q9H0R3 208 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 hADV38S2A0JD32 116 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 C5orf63A6NC05 138 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 NCBP2LA6PVI3 153 aaKnown RBP13.98□□□□□ -0.17
CUX1-213ENST00000549414 TOX4O94842 621 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 MUC1P15941 1255 aaPredicted RBP13.98□□□□□ -0.17
CUX1-213ENST00000549414 PRDX2P32119 198 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 NPBWR1P48145 328 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 RNF144BQ7Z419 303 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 SSMEM1Q8WWF3 244 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 UBTD1Q9HAC8 227 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 SAP30LQ9HAJ7 183 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 HIF1ANQ9NWT6 349 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 KIAA1456Q9P272 454 aa13.98□□□□□ -0.17
CUX1-213ENST00000549414 ZNF737O75373 536 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 DEDDO75618 318 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 HBZP02008 142 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 KLF14Q8TD94 323 aaPredicted RBP13.97□□□□□ -0.17
CUX1-213ENST00000549414 CORO2AQ92828 525 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 TUBG2Q9NRH3 451 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 FAM157AC9JC47 383 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 RHBDL1O75783 438 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 GZMHP20718 246 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 UCNP55089 124 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 FOXG1P55316 489 aaPredicted RBP13.97□□□□□ -0.17
CUX1-213ENST00000549414 TIGITQ495A1 244 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 PRR33A8MZF0 331 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 FAM87AP0C7U9 286 aa13.97□□□□□ -0.17
CUX1-213ENST00000549414 CD200P41217 278 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms