RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 HEXA-AS1Q9H8Q6 139 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 NLKQ9UBE8 527 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 A0A087X0K7 114 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 IGHV2-70DA0A0C4DH43 119 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 LINC00862A6NCI5 91 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 C5orf52A6NGY3 159 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 FBLL1A6NHQ2 334 aaKnown RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 C17orf51A8MQB3 221 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 A8MUA0 341 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 B5MCH6 92 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 SEC14L6B5MCN3 397 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 SH2D1BO14796 132 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 LYRM1O43325 122 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 CXCL1P09341 107 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 MGMTP16455 207 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 CTRB1P17538 263 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 AADACP22760 399 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 PPIFP30405 207 aaKnown RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 CDAP32320 146 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 GPX4P36969 197 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 P2RY1P47900 373 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 THBS3P49746 956 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 GTF2A1P52655 376 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 BRWD1-AS2P59051 145 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 HNRNPA0Q13151 305 aaKnown RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 C22orf42Q6IC83 251 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 BATF2Q8N1L9 274 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 Q8N7P7 452 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 OR5H6Q8NGV6 325 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM222Q9H0R3 208 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 IFI27L2Q9H2X8 130 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 CABIN1Q9Y6J0 2220 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 DISC1C4P0D8 188 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 MPZL1O95297 269 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 CFDP00746 253 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 STATHP02808 62 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 HTR5AP47898 357 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 BCAP31P51572 246 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 RGS21Q2M5E4 152 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 OR51E1Q8TCB6 317 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 GLMPQ8WWB7 406 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 MRPL53Q96EL3 112 aaKnown RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 DPCDQ9BVM2 203 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM59Q9BXS4 323 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 DPAGT1Q9H3H5 408 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 IDI2-AS1Q9NZ38 188 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 KIF25Q9UIL4 384 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 SCP2D1Q9UJQ7 156 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 ELF5Q9UKW6 265 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 PIGLQ9Y2B2 252 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 OR2W1Q9Y3N9 320 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 AMMECR1Q9Y4X0 333 aaPredicted RBP3.98□□□□□ -1.77
SCAF11-212ENST00000549162 LY96Q9Y6Y9 160 aa3.98□□□□□ -1.77
SCAF11-212ENST00000549162 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 PSMB11A5LHX3 300 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 ZNF732B4DXR9 585 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 USP17L23D6RBM5 183 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 CLDN1O95832 211 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 NDUFB7P17568 137 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 MPV17P39210 176 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 UBE2KP61086 200 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 VBP1P61758 197 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 RRAS2P62070 204 aaPredicted RBP3.97□□□□□ -1.77
SCAF11-212ENST00000549162 PRAMEF20Q5VT98 475 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 TMEM14EPQ6UXP3 125 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 LAX1Q8IWV1 398 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 SMAP2Q8WU79 429 aaPredicted RBP3.97□□□□□ -1.77
SCAF11-212ENST00000549162 FRZBQ92765 325 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 GINS3Q9BRX5 216 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 NDRG3Q9UGV2 375 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 CHTOPQ9Y3Y2 248 aaKnown RBP3.97□□□□□ -1.77
SCAF11-212ENST00000549162 PRR14LQ5THK1 2151 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 FAM183AA6NL82 134 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 F8WDY8 70 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 PRSS3P35030 304 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 CCR6P51684 374 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 UBE2E1P51965 193 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 CXADRP78310 365 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 GFRALQ6UXV0 394 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 ST8SIA2Q92186 375 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 ASF1BQ9NVP2 202 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 RNF24Q9Y225 148 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 SOCS1O15524 211 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 MPDU1O75352 247 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 DEDDO75618 318 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 OR2F2O95006 317 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 SOX2P48431 317 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 OR2F1Q13607 317 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 PIK3CD-AS1Q5SR53 167 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 BCDIN3DQ7Z5W3 292 aaKnown RBP3.97□□□□□ -1.77
SCAF11-212ENST00000549162 KCNRGQ8N5I3 272 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 SUMF2Q8NBJ7 301 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 OR10AC1Q8NH08 325 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 ADAT1Q9BUB4 502 aaKnown RBP3.97□□□□□ -1.77
SCAF11-212ENST00000549162 SCRT1Q9BWW7 348 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 DMRT1Q9Y5R6 373 aa3.97□□□□□ -1.77
SCAF11-212ENST00000549162 ANK3Q12955 4377 aaKnown RBP3.96□□□□□ -1.77
SCAF11-212ENST00000549162 C5orf63A6NC05 138 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 ZFP92A6NM28 416 aa3.96□□□□□ -1.78
SCAF11-212ENST00000549162 H2AFB1P0C5Y9 115 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms