RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 MCEMP1Q8IX19 187 aa10.55□□□□□ -0.72
SLC38A1-206ENST00000549049 CCDC54Q8NEL0 328 aa10.55□□□□□ -0.72
SLC38A1-206ENST00000549049 KCNE4Q8WWG9 221 aa10.55□□□□□ -0.72
SLC38A1-206ENST00000549049 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
SLC38A1-206ENST00000549049 SLC25A22Q9H936 323 aa10.55□□□□□ -0.72
SLC38A1-206ENST00000549049 UFSP2Q9NUQ7 469 aa10.55□□□□□ -0.72
SLC38A1-206ENST00000549049 ATP23Q9Y6H3 246 aa10.55□□□□□ -0.72
SLC38A1-206ENST00000549049 NAPSAO96009 420 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 IGHV2-70P01814 119 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 PLP2Q04941 152 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 EIF3IQ13347 325 aaKnown RBP10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 COL19A1Q14993 1142 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 CABLES2Q9BTV7 478 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 C1QTNF5Q9BXJ0 243 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 TRAV24A0A0B4J272 114 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 ANKRD30BLA7E2S9 258 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 HOXB1P14653 301 aaPredicted RBP10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 CDX1P47902 265 aaPredicted RBP10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 ERVS71-1P61550 626 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 GAMTQ14353 236 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 RTP5Q14D33 572 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 KHDC3LQ587J8 217 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 PCSK4Q6UW60 755 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 Q6ZSR3 168 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 FAM185AQ8N0U4 392 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 FAM58AQ8N1B3 248 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 MRPL30Q8TCC3 161 aaKnown RBP10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 WFIKKN1Q96NZ8 548 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 C11orf1Q9H5F2 150 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 PRSS50Q9UI38 385 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 OR2W1Q9Y3N9 320 aa10.54□□□□□ -0.72
SLC38A1-206ENST00000549049 TPRP12270 2363 aaKnown RBP10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 SYNGR2O43760 224 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 IGHV3-13P01766 116 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 IGHV3-7P01780 117 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 CEACAM21Q3KPI0 293 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 NUFIP2Q7Z417 695 aaKnown RBP10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 TPRX1Q8N7U7 411 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 ABHD5Q8WTS1 349 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 CT55Q8WUE5 264 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 LHX4Q969G2 390 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 OR4C12Q96R67 309 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 SH2D2AQ9NP31 389 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 DLL3Q9NYJ7 618 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 PILRBQ9UKJ0 227 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 SYNGR4O95473 234 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 EGR1P18146 543 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 CLN3Q13286 438 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 LINC00469Q8N7U9 141 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 ADGRG7Q96K78 797 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 DEFB127Q9H1M4 99 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 RBKSQ9H477 322 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 IL36GQ9NZH8 169 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 DEFA6Q01524 100 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 IL24Q13007 206 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 ZNF726P1Q15940 193 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 ALKBH6Q3KRA9 238 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 ZNF506Q5JVG8 444 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 BTNL3Q6UXE8 466 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 OR10V1Q8NGI7 309 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 APH1AQ96BI3 265 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 RCC1LQ96I51 464 aaKnown RBP10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 SLC39A9Q9NUM3 307 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 RNF115Q9Y4L5 304 aa10.53□□□□□ -0.72
SLC38A1-206ENST00000549049 CDIPTO14735 213 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 HBE1P02100 147 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 CEACAM6P40199 344 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 GLIPR1P48060 266 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 ABLIM2Q6H8Q1 611 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 RFESDQ8TAC1 157 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 APOBEC3DQ96AK3 386 aaPredicted RBP10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 MEGF10Q96KG7 1140 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 SMIM7Q9BQ49 75 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 BOD1L1Q8NFC6 3051 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 LOC102723971A0A1B0GUV8 181 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 MAP1LC3B2A6NCE7 125 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 DEFB108AA8MXU0 73 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 CYTIPO60759 359 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 HSPB1P04792 205 aaKnown RBP10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 LMO1P25800 156 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 PMS2CLQ68D20 193 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 UNQ6494/PRO21346Q6UXR6 183 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 MAP1LC3BQ9GZQ8 125 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 CLN8Q9UBY8 286 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 LAMP3Q9UQV4 416 aa10.52□□□□□ -0.73
SLC38A1-206ENST00000549049 IGHV3-43A0A0B4J1X8 118 aa10.51□□□□□ -0.73
SLC38A1-206ENST00000549049 H0Y980 276 aa10.51□□□□□ -0.73
SLC38A1-206ENST00000549049 PHOX2AO14813 284 aa10.51□□□□□ -0.73
SLC38A1-206ENST00000549049 DFFBO76075 338 aa10.51□□□□□ -0.73
SLC38A1-206ENST00000549049 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
SLC38A1-206ENST00000549049 IGHV3-43DP0DP04 118 aa10.51□□□□□ -0.73
SLC38A1-206ENST00000549049 APLNRP35414 380 aa10.51□□□□□ -0.73
SLC38A1-206ENST00000549049 DCAF12Q5T6F0 453 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms