RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 DEFB108AA8MXU0 73 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 HSD17B6O14756 317 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 NDUFB3O43676 98 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 YPEL1O60688 119 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 MPC2O95563 127 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 GNLYP22749 145 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 UCP1P25874 307 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 RAB7AP51149 207 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 EDDM3BP56851 147 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 CATR1Q13166 79 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ATMQ13315 3056 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 EDDM3AQ14507 147 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ZNF345Q14585 488 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 IAH1Q2TAA2 248 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-215ENST00000547672 MST1LQ2TV78 715 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 LRRC10Q5BKY1 277 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ZNF818PQ6ZRF7 136 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ACOT7LQ6ZUV0 252 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ZNF645Q8N7E2 425 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 BOD1L1Q8NFC6 3051 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 NEU4Q8WWR8 484 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ITLN2Q8WWU7 325 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-215ENST00000547672 CCL17Q92583 94 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 WDR89Q96FK6 387 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ABHD14BQ96IU4 210 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 C18orf12Q96KH6 178 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 PCNX1Q96RV3 2341 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 CCL28Q9NRJ3 127 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 CBLN4Q9NTU7 201 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 TAS2R3Q9NYW6 316 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ASPMQ8IZT6 3477 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 F2RL2O00254 374 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 CCSO14618 274 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 GPR37O15354 613 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 ARPC5O15511 151 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 OR8U9P0C7N5 309 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 SLC25A6P12236 298 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 VDAC1P21796 283 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 OPCMLQ14982 345 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 GGNBP1Q5YKI7 109 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 THOC7Q6I9Y2 204 aaKnown RBP11.21□□□□□ -0.61
PTCH1-215ENST00000547672 PRSS54Q6PEW0 395 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 ZNF66Q6ZN08 573 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 TMUB2Q71RG4 321 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 DEFB108BQ8NET1 73 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 OR52M1Q8NGK5 317 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 OR8U1Q8NH10 309 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 OR1L1Q8NH94 360 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 CD300LFQ8TDQ1 290 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 RBPMSQ93062 196 aaKnown RBP11.21□□□□□ -0.61
PTCH1-215ENST00000547672 MSI2Q96DH6 328 aaKnown RBP11.21□□□□□ -0.61
PTCH1-215ENST00000547672 GAL3ST2Q9H3Q3 398 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 GSKIPQ9P0R6 139 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 OR1A1Q9P1Q5 309 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 GNG12Q9UBI6 72 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 KAAG1Q9UBP8 84 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 KCNS2Q9ULS6 477 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 LAMP3Q9UQV4 416 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 MAB21L2Q9Y586 359 aa11.21□□□□□ -0.61
PTCH1-215ENST00000547672 DYSFO75923 2080 aa11.21□□□□□ -0.62
PTCH1-215ENST00000547672 CHD3Q12873 2000 aaKnown RBP11.21□□□□□ -0.62
PTCH1-215ENST00000547672 USP24Q9UPU5 2620 aa11.21□□□□□ -0.62
PTCH1-215ENST00000547672 ACACBO00763 2458 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 IGKV1D-13A0A0B4J2D9 117 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 KANTRA0A1W2PQU2 76 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 G3V3Q6 166 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 C15orf65H3BRN8 121 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 ADAP1O75689 374 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 ZNF205O95201 554 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 GYPAP02724 150 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 IGKV1-13P0DP09 117 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 GRNP28799 593 aaKnown RBP11.2□□□□□ -0.62
PTCH1-215ENST00000547672 SP6Q3SY56 376 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 SPRNQ5BIV9 151 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 Q5BKY6 102 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 TMEM268Q5VZI3 342 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 OR13A1Q8NGR1 328 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 TIMD4Q96H15 378 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 GAFA1Q96PS6 74 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 CCL13Q99616 98 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 HSD17B10Q99714 261 aaKnown RBP11.2□□□□□ -0.62
PTCH1-215ENST00000547672 ARL6Q9H0F7 186 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 PLSCR3Q9NRY6 295 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 TNFSF18Q9UNG2 199 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 GAB2Q9UQC2 676 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
PTCH1-215ENST00000547672 TRAV39A0A0B4J263 110 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 A0A1W2PPH5 198 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 TMPRSS2O15393 492 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 ZG16O60844 167 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 TSC22D2O75157 780 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 RP2O75695 350 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 LYL1P12980 280 aa11.19□□□□□ -0.62
PTCH1-215ENST00000547672 PVALBP20472 110 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms