RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TMEM160Q9NX00 188 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 CALYQ9NYX4 217 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 NDUFA13Q9P0J0 144 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 AK3Q9UIJ7 227 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 KCNK7Q9Y2U2 307 aa5.18□□□□□ -1.58
PRKDC-211ENST00000546304 TRAV39A0A0B4J263 110 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 KBTBD11-OT1A0A1B0GTJ5 212 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 hCG_1809904A0A1W2PP81 198 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 A0A1W2PPE2 198 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 A0A1W2PR64 198 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 A0A1W2PRV1 198 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF729A6NN14 1252 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-211ENST00000546304 C17orf98A8MV24 154 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 C12orf77C9JDV5 145 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 RGS5O15539 181 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 HPGDSO60760 199 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 FSHBP01225 129 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 MT-ND4P03905 459 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 FCGR3AP08637 254 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 CD3GP09693 182 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 DLX1P56177 255 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 TMEM50BP56557 158 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 GNG2P59768 71 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 HLA-DRB3P79483 266 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 MRPS15P82914 257 aaKnown RBP5.17□□□□□ -1.58
PRKDC-211ENST00000546304 PRB3Q04118 309 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-211ENST00000546304 KLRD1Q13241 179 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 NCR3LG1Q68D85 454 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 TRAT1Q6PIZ9 186 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 HEPN1Q6WQI6 88 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 Q6ZPA2 131 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 Q6ZTK2 550 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 LAX1Q8IWV1 398 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 IZUMO1Q8IYV9 350 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 Q8N7P7 452 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 OR4K15Q8NH41 348 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 MCFD2Q8NI22 146 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 CCDC107Q8WV48 283 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 NUDCD2Q8WVJ2 157 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 CORO2AQ92828 525 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 CMSS1Q9BQ75 279 aaKnown RBP5.17□□□□□ -1.58
PRKDC-211ENST00000546304 FAAP24Q9BTP7 215 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF747Q9BV97 191 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 RIMS4Q9H426 269 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-211ENST00000546304 DIABLOQ9NR28 239 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 TAS2R3Q9NYW6 316 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 TRAPPC2LQ9UL33 140 aa5.17□□□□□ -1.58
PRKDC-211ENST00000546304 TRAV18A0A075B6X5 111 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 IGHV3OR16-10A0A075B7F0 116 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 TRBV6-6A0A0A6YYG2 114 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 FAM172BPA6NC97 362 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 FAM25AB3EWG3 89 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 FAM25CB3EWG5 89 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 FAM25GB3EWG6 89 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 RNASEK-C17orf49H0YIS7 233 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 C15orf65H3BRN8 121 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 SPINT2O43291 252 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 XRCC3O43542 346 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 MMP23AO75900 390 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 IGHV1-8P0DP01 117 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 IGHV4-38-2P0DP08 117 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 SRD5A1P18405 259 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 RCC1P18754 421 aaPredicted RBP5.16□□□□□ -1.58
PRKDC-211ENST00000546304 ELK1P19419 428 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 OMGP23515 440 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 DTYMKP23919 212 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 PRTN3P24158 256 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 COX7A1P24310 79 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 SRP14P37108 136 aaKnown RBP5.16□□□□□ -1.58
PRKDC-211ENST00000546304 TALDO1P37837 337 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 MNDAP41218 407 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 TAS2R20P59543 309 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 FOXL1Q12952 345 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 ARFRP1Q13795 201 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 HMGN3Q15651 99 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 PNLIPRP3Q17RR3 467 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 C17orf58Q2M2W7 97 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 TMEM30BQ3MIR4 351 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF260Q3ZCT1 412 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 CHRFAM7AQ494W8 412 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 KLF17Q5JT82 389 aaPredicted RBP5.16□□□□□ -1.58
PRKDC-211ENST00000546304 GPR157Q5UAW9 335 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 HACD4Q5VWC8 232 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 CNIH2Q6PI25 160 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 C1orf122Q6ZSJ8 110 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF554Q86TJ5 538 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 PRR18Q8N4B5 295 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 C11orf42Q8N5U0 333 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 ZNF565Q8N9K5 539 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 UBALD1Q8TB05 177 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 NANPQ8TBE9 248 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 SETD6Q8TBK2 473 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 GCDHQ92947 438 aaPredicted RBP5.16□□□□□ -1.58
PRKDC-211ENST00000546304 TNFRSF14Q92956 283 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 LHX4Q969G2 390 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 DGCR14Q96DF8 476 aaKnown RBP5.16□□□□□ -1.58
PRKDC-211ENST00000546304 S100A16Q96FQ6 103 aaKnown RBP5.16□□□□□ -1.58
PRKDC-211ENST00000546304 CMTM3Q96MX0 182 aa5.16□□□□□ -1.58
PRKDC-211ENST00000546304 NXF2Q9GZY0 626 aaKnown RBP5.16□□□□□ -1.58
PRKDC-211ENST00000546304 MIXL1Q9H2W2 232 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms