RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 PATJQ8NI35 1801 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 NPIPB13A6NJU9 1138 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 DHRS7CA6NNS2 312 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 NPIPB4C9JG80 1138 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 SRP14P37108 136 aaKnown RBP10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FHITP49789 147 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 TMEM187Q14656 261 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 ETFRF1Q6IPR1 90 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 OR5D13Q8NGL4 314 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 P2RX4Q99571 388 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 CFHR5Q9BXR6 569 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 WDR54Q9H977 334 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 SCTP09683 121 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 TNFRSF1AP19438 455 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 DDTP30046 118 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 SLC23A3Q6PIS1 610 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 TBX15Q96SF7 602 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 BARX1Q9HBU1 254 aaPredicted RBP10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 OR1A1Q9P1Q5 309 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 CLN8Q9UBY8 286 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 PSME4Q14997 1843 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A10PA6NDY2 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A18PA6NE21 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A16PA6NEW6 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A20PA6NIJ5 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A8PA6NJQ4 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A7PA6NKC0 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A22PA8MWA6 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A12PA8MX19 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A5PA8MXJ8 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A23PA8MXZ1 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 SNURFLB1AK76 121 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 M0R2Z0 102 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 PRRG2O14669 202 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 GCGP01275 180 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 IGHV3-13P01766 116 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 IGHV3-7P01780 117 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 SP1P08047 785 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A15PP0C7V4 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A13PP0C7W8 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A14PP0C7W9 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 FAM90A24PP0C7X0 464 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 IER3P46695 156 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 B2MP61769 119 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 OR1P1Q8NH06 330 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 SGMS2Q8NHU3 365 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 RAB24Q969Q5 203 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 STARD4Q96DR4 205 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 GNB4Q9HAV0 340 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 TMEM74BQ9NUR3 256 aa10.6□□□□□ -0.71
NPC1L1-204ENST00000546276 RP1L1Q8IWN7 2480 aaPredicted RBP10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 IGHV5-10-1A0A0J9YXX1 117 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 SRSF10O75494 262 aaKnown RBP10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 FNDC7Q5VTL7 733 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 SELENOHQ8IZQ5 122 aaKnown RBP10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 CA5BP1Q8WTZ4 195 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 PAM16Q9Y3D7 125 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 A0A1B0GTI1 187 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 MRPS11P82912 194 aaKnown RBP10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 CEACAM21Q3KPI0 293 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 LRRC75AQ8NAA5 344 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 TMEM230Q96A57 120 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 ZNF488Q96MN9 340 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 HEXA-AS1Q9H8Q6 139 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 IL36GQ9NZH8 169 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 MYOFQ9NZM1 2061 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 TRBV23-1A0A0A0MS06 115 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 CLEC3BP05452 202 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 TIMD4Q96H15 378 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 IL17BQ9UHF5 180 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 TINAGQ9UJW2 476 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 TCFL5Q9UL49 500 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 LOC101059948A0A1B0GTJ6 334 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 NDUFB3O43676 98 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 CCL4P13236 92 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 GZMHP20718 246 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 ZNF83P51522 516 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 GTF2H5Q6ZYL4 71 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 GGACTQ9BVM4 153 aa10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 CISD1Q9NZ45 108 aaKnown RBP10.59□□□□□ -0.71
NPC1L1-204ENST00000546276 HELTA6NFD8 242 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 FAM157CP0CG43 387 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 HTR1DP28221 377 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 LRRC10Q5BKY1 277 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 VN1R17PQ8TDU5 208 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 BLNKQ8WV28 456 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 HFEQ30201 348 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 MRPL54Q6P161 138 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 MISP3Q96FF7 219 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 RHOVQ96L33 236 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 PCGF1Q9BSM1 259 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 TNS1Q9HBL0 1735 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 TRAV17A0A0B4J275 112 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 TEX50A0A1B0GTY4 177 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 PGLYRP1O75594 196 aaPredicted RBP10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 IGKV3-11P04433 115 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 GLIPR1P48060 266 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 UCP3P55916 312 aa10.58□□□□□ -0.72
NPC1L1-204ENST00000546276 PAFAH1B2P68402 229 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms