RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TRIM61Q5EBN2 209 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 HAPLN4Q86UW8 402 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 ANAPC16Q96DE5 110 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 FOXB1Q99853 325 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 SF3B5Q9BWJ5 86 aaKnown RBP12.12□□□□□ -0.47
SRP54-202ENST00000546080 SNHG12Q9BXW3 62 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 PARLQ9H300 379 aa12.12□□□□□ -0.47
SRP54-202ENST00000546080 SPTBN5Q9NRC6 3674 aaKnown RBP12.12□□□□□ -0.47
SRP54-202ENST00000546080 UBE2L5PA0A1B0GUS4 154 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 B4E171 279 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 TMEM250H0YL14 139 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 ZIC3O60481 467 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 CCL3P10147 92 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 G0S2P27469 103 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 TSPAN7P41732 249 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 PCBD1P61457 104 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 TLE1Q04724 770 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 TESK1Q15569 626 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 OR2T10Q8NGZ9 312 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 FGFBP3Q8TAT2 258 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 MRPL30Q8TCC3 161 aaKnown RBP12.11□□□□□ -0.47
SRP54-202ENST00000546080 TAF15Q92804 592 aaKnown RBP eCLIP12.11□□□□□ -0.47
SRP54-202ENST00000546080 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 PARD6GQ9BYG4 376 aaPredicted RBP12.11□□□□□ -0.47
SRP54-202ENST00000546080 IL36RNQ9UBH0 155 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 OR2W1Q9Y3N9 320 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 UNC13CQ8NB66 2214 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 MMP7P09237 267 aaPredicted RBP12.11□□□□□ -0.47
SRP54-202ENST00000546080 FGF5P12034 268 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 RAC1P63000 192 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 PCSK4Q6UW60 755 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 OR10J5Q8NHC4 309 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 LSM10Q969L4 123 aaKnown RBP12.11□□□□□ -0.47
SRP54-202ENST00000546080 CLDN23Q96B33 292 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 OR4C12Q96R67 309 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 RARRES3Q9UL19 164 aa12.11□□□□□ -0.47
SRP54-202ENST00000546080 SPEGQ15772 3267 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 ASXL3Q9C0F0 2248 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 A0A1B0GWJ7 208 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 GJE1A6NN92 205 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 M0R143 59 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 CELA2AP08217 269 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 NTF4P34130 210 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 GPM6AP51674 278 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 HNF4GQ14541 408 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 CEACAM16Q2WEN9 425 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 AAED1Q7RTV5 226 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 CISD2Q8N5K1 135 aaKnown RBP12.1□□□□□ -0.47
SRP54-202ENST00000546080 RPP25LQ8N5L8 163 aaKnown RBP12.1□□□□□ -0.47
SRP54-202ENST00000546080 SPSB4Q96A44 273 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 CBLN4Q9NTU7 201 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
SRP54-202ENST00000546080 ERRFI1Q9UJM3 462 aaPredicted RBP12.1□□□□□ -0.47
SRP54-202ENST00000546080 TRAPPC2LH3BP13 241 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 HMGB3O15347 200 aaKnown RBP12.09□□□□□ -0.47
SRP54-202ENST00000546080 GGCTO75223 188 aaKnown RBP12.09□□□□□ -0.47
SRP54-202ENST00000546080 SCGB1D1O95968 90 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 IGKV1-39P01597 117 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 GYPAP02724 150 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 IGKV1D-39P04432 117 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 HOXA6P31267 233 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
SRP54-202ENST00000546080 ERVFC1-1P60608 527 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 SLC38A11Q08AI6 406 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 PRDX4Q13162 271 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 ZNF324BQ6AW86 544 aaPredicted RBP12.09□□□□□ -0.47
SRP54-202ENST00000546080 TEX38Q6PEX7 206 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 SAXO1Q8IYX7 474 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 SLC25A45Q8N413 288 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 OR56B2PQ8NGI1 322 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 OR1K1Q8NGR3 316 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 OR4F5Q8NH21 305 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 OR4F4Q96R69 305 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 RIMS4Q9H426 269 aaPredicted RBP12.09□□□□□ -0.47
SRP54-202ENST00000546080 SLC25A22Q9H936 323 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 MYO15AQ9UKN7 3530 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 LRP5LA4QPB2 252 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 TOX3O15405 576 aaPredicted RBP12.09□□□□□ -0.47
SRP54-202ENST00000546080 IGKV1D-33P01593 117 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 IGKV1-33P01594 117 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 CNN1P51911 297 aaKnown RBP12.09□□□□□ -0.47
SRP54-202ENST00000546080 RAC3P60763 192 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 GNB2P62879 340 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 KCNIP4Q6PIL6 250 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.09□□□□□ -0.47
SRP54-202ENST00000546080 GBGT1Q8N5D6 347 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 C1QTNF5Q9BXJ0 243 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 FKBP11Q9NYL4 201 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 EML6Q6ZMW3 1958 aa12.09□□□□□ -0.47
SRP54-202ENST00000546080 TYMSP04818 313 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 COX5BP10606 129 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 MKXQ8IYA7 352 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 OR10V1Q8NGI7 309 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 MANBALQ9NQG1 85 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 TIMM9Q9Y5J7 89 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 CHD3Q12873 2000 aaKnown RBP12.08□□□□□ -0.48
SRP54-202ENST00000546080 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 C2CD4DB7Z1M9 353 aa12.08□□□□□ -0.48
SRP54-202ENST00000546080 DNPH1O43598 174 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms