RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 AAED1Q7RTV5 226 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 GRINAQ7Z429 371 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM123Q8N131 208 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 SPICQ8N5J4 248 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 OR4S1Q8NGB4 309 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 OR1F12Q8NHA8 337 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 CCL17Q92583 94 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 LRRC39Q96DD0 335 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 ZHX1-C8orf76Q96EF9 292 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 L3HYPDHQ96EM0 354 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 PELI1Q96FA3 418 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 OXGR1Q96P68 337 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 SDF2Q99470 211 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 GABARAPL3Q9BY60 117 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 PIGUQ9H490 435 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 CRLF2Q9HC73 371 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM106BQ9NUM4 274 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 DDX18Q9NVP1 670 aaKnown RBP1.91□□□□□ -2.1
SNHG1-224ENST00000545688 UBAP1Q9NZ09 502 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 TAAR3PQ9P1P4 343 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 VPS29Q9UBQ0 182 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 SLC7A8Q9UHI5 535 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 PCTPQ9UKL6 214 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 MYCBP2O75592 4640 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 HMCN2Q8NDA2 5059 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 PKD1P98161 4303 aa1.9□□□□□ -2.1
SNHG1-224ENST00000545688 TMED7-TICAM2A0A0A6YYA0 188 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 IGHV1-69DA0A0B4J2H0 117 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 A0A1B0GWJ7 208 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 TMEM72A0PK05 275 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 FAM159BA6NKW6 160 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF850A8MQ14 1090 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 SYCE1LA8MT33 242 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF879B4DU55 563 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 MANBAO00462 879 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 DNALI1O14645 258 aaPredicted RBP1.9□□□□□ -2.11
SNHG1-224ENST00000545688 FCMRO60667 390 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 PIAS1O75925 651 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 IGHV1-69P01742 117 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 HLA-HP01893 362 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 FGGP02679 453 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 PTMAP06454 111 aaKnown RBP1.9□□□□□ -2.11
SNHG1-224ENST00000545688 OR8G3PP0DMU2 310 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 STMN1P16949 149 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 MAGEA12P43365 314 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 CCNG1P51959 295 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 FOXA1P55317 472 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 KLF3P57682 345 aaPredicted RBP1.9□□□□□ -2.11
SNHG1-224ENST00000545688 OR2B6P58173 313 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 ERVS71-1P61550 626 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 MERTKQ12866 999 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 ERCC8Q13216 396 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 MOGQ16653 247 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF181Q2M3W8 571 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 CEACAM16Q2WEN9 425 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 TRMT5Q32P41 509 aaKnown RBP1.9□□□□□ -2.11
SNHG1-224ENST00000545688 SPIN4Q56A73 249 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 TMEM41BQ5BJD5 291 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 DMRTC1Q5HYR2 192 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 METAP1DQ6UB28 335 aaPredicted RBP1.9□□□□□ -2.11
SNHG1-224ENST00000545688 CMC1Q7Z7K0 106 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF573Q86YE8 665 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 SLC38A6Q8IZM9 456 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 STPG2Q8N412 459 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 MMGT1Q8N4V1 131 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 COX18Q8N8Q8 333 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 NECAP1Q8NC96 275 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 OR4F6Q8NGB9 312 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 PIFOQ8TCI5 191 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 GEMIN6Q8WXD5 167 aaKnown RBP1.9□□□□□ -2.11
SNHG1-224ENST00000545688 TMEM234Q8WY98 164 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 CDS1Q92903 461 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 TNFRSF14Q92956 283 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 MS4A4EQ96PG1 132 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 TSSK3Q96PN8 268 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 RNF5Q99942 180 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 NMRAL1Q9HBL8 299 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 NMRK1Q9NWW6 199 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 RNF14Q9UBS8 474 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 OR5V1Q9UGF6 321 aa1.9□□□□□ -2.11
SNHG1-224ENST00000545688 TANC2Q9HCD6 1990 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SUPT3HB4E1H0 165 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 H3BSA7 217 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 PHYHO14832 338 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SEC22BO75396 215 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 KLHL2O95198 593 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 OTCP00480 354 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 OPN1SWP03999 348 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 HMGN2P05204 90 aaKnown RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 C2P06681 752 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 TPM3P06753 285 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 MMP7P09237 267 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 UBTFL6P0CB48 400 aaPredicted RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 CRABP2P29373 138 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 MPV17P39210 176 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 ACAA2P42765 397 aaKnown RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 POLR2HP52434 150 aaKnown RBP1.89□□□□□ -2.11
SNHG1-224ENST00000545688 SLC35A2P78381 396 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 PITPNAQ00169 270 aa1.89□□□□□ -2.11
SNHG1-224ENST00000545688 C2orf80Q0P641 193 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms