RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PSENENQ9NZ42 101 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 CACNG5Q9UF02 275 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 EYSQ5T1H1 3165 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 FREM1Q5H8C1 2179 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 A0A0G2JMM0 328 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 A0A1W2PPB8 328 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 A0A1W2PRS3 328 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 LRRC3CA6NJW4 275 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 OR5B21A6NL26 309 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 CEBPZOSA8MTT3 80 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 KIR3DP1A8MWS1 328 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 TMEM250H0YL14 139 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.45□□□□□ -1.22
TDP1-204ENST00000545686 SLC33A1O00400 549 aaPredicted RBP7.45□□□□□ -1.22
TDP1-204ENST00000545686 KBTBD11O94819 623 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 IGHEP01854 428 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 PGA5P0DJD9 388 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 FGF7P21781 194 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 APLNRP35414 380 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 PDZD11Q5EBL8 140 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 C5orf24Q7Z6I8 188 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 LILRB2Q8N423 598 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 OR4X1Q8NH49 305 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 OR51H1Q8NH63 302 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 SNX22Q96L94 193 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 GPR87Q9BY21 358 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 SMOC1Q9H4F8 434 aa7.45□□□□□ -1.22
TDP1-204ENST00000545686 A0A087X0M5 115 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 A0A1B0GX30 115 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 ATXN7O15265 892 aaPredicted RBP7.44□□□□□ -1.22
TDP1-204ENST00000545686 PFN1P07737 140 aaKnown RBP7.44□□□□□ -1.22
TDP1-204ENST00000545686 METTL15P1P0C7V9 234 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 IL2RGP31785 369 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 CEACAM6P40199 344 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 FOLR3P41439 243 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 LBX1P52954 281 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 MEF2BQ02080 365 aaPredicted RBP7.44□□□□□ -1.22
TDP1-204ENST00000545686 TRA2AQ13595 282 aaKnown RBP eCLIP7.44□□□□□ -1.22
TDP1-204ENST00000545686 SSX7Q7RTT5 188 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 HAPLN4Q86UW8 402 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 ZNF573Q86YE8 665 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 ACY3Q96HD9 319 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 RHOVQ96L33 236 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 HS3ST6Q96QI5 342 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 HIST1H2AAQ96QV6 131 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 ACTR3CQ9C0K3 210 aaPredicted RBP7.44□□□□□ -1.22
TDP1-204ENST00000545686 VSIRQ9H7M9 311 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 TMEM9BQ9NQ34 198 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 IL36RNQ9UBH0 155 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 SPEGQ15772 3267 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 TRAV24A0A0B4J272 114 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 HSPB6O14558 160 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 ZNF737O75373 536 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 LY86O95711 162 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 IGKV1-39P01597 117 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 IGKV1-5P01602 117 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 IGKV1D-39P04432 117 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 FGF8P55075 233 aaPredicted RBP7.44□□□□□ -1.22
TDP1-204ENST00000545686 ARL16Q0P5N6 197 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 TMEM241Q24JQ0 296 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 Q6ZRM9 215 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 OR1P1Q8NH06 330 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 ABHD3Q8WU67 409 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 OR5P3Q8WZ94 311 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 TAF15Q92804 592 aaKnown RBP eCLIP7.44□□□□□ -1.22
TDP1-204ENST00000545686 RAB24Q969Q5 203 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 NOL4LQ96MY1 436 aaPredicted RBP7.44□□□□□ -1.22
TDP1-204ENST00000545686 SSX3Q99909 188 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 PKIBQ9C010 78 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 RBKSQ9H477 322 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 MANBALQ9NQG1 85 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 ERRFI1Q9UJM3 462 aaPredicted RBP7.44□□□□□ -1.22
TDP1-204ENST00000545686 MPC1Q9Y5U8 109 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 DOCK10Q96BY6 2186 aa7.44□□□□□ -1.22
TDP1-204ENST00000545686 SLC31A2O15432 143 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 MRPL33O75394 65 aaKnown RBP7.43□□□□□ -1.22
TDP1-204ENST00000545686 MBP02144 154 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 IAPPP10997 89 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 PDLIM4P50479 330 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 GFRA1P56159 465 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 FAM3BP58499 235 aaPredicted RBP7.43□□□□□ -1.22
TDP1-204ENST00000545686 ARF1P84077 181 aaKnown RBP7.43□□□□□ -1.22
TDP1-204ENST00000545686 CLN3Q13286 438 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 BSXQ3C1V8 233 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 C20orf204Q6ZNR8 217 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 OR5B12Q96R08 314 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 C2orf88Q9BSF0 95 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 CRIM1Q9NZV1 1036 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 PRSS50Q9UI38 385 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 WDR87Q6ZQQ6 2873 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 C5orf49A4QMS7 147 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 RNF212BA8MTL3 300 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 K7ESF4 209 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 SYNGR1O43759 233 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 GCGP01275 180 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 IGLV2-14P01704 120 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 AMBPP02760 352 aa7.43□□□□□ -1.22
TDP1-204ENST00000545686 RFPL3SP0C7P2 107 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms