RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 NXPH2O95156 264 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 TAGLN2P37802 199 aaKnown RBP10.54□□□□□ -0.72
PAAF1-215ENST00000544909 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 DHRS13Q6UX07 377 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 CLEC9AQ6UXN8 241 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 SLC35E3Q7Z769 313 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 BCL2L14Q9BZR8 327 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 C12orf49Q9H741 205 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 SIRT7Q9NRC8 400 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 TIMM9Q9Y5J7 89 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 KNTC1P50748 2209 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 WDFY3Q8IZQ1 3526 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 M0R036 132 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 SOX15O60248 233 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 PSG2P11465 335 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 KITLGP21583 273 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 HOXC12P31275 282 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 PPP1CCP36873 323 aaKnown RBP10.54□□□□□ -0.72
PAAF1-215ENST00000544909 PNRC1Q12796 327 aaPredicted RBP10.54□□□□□ -0.72
PAAF1-215ENST00000544909 WDR86Q86TI4 376 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 ZNF645Q8N7E2 425 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 WDR31Q8NA23 367 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 RNASE11Q8TAA1 199 aaKnown RBP10.54□□□□□ -0.72
PAAF1-215ENST00000544909 SFT2D1Q8WV19 159 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 CLCC1Q96S66 551 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 P2RX4Q99571 388 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 OR2J1Q9GZK6 312 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 FBXO7Q9Y3I1 522 aa10.54□□□□□ -0.72
PAAF1-215ENST00000544909 OOEPA6NGQ2 149 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 CDRT15L2A8MXV6 281 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 CST7O76096 145 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 IGHV1-2P23083 117 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 EIF2S3P41091 472 aaKnown RBP10.53□□□□□ -0.72
PAAF1-215ENST00000544909 CATR1Q13166 79 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 TGIF1Q15583 401 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 IGFBP7Q16270 282 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 C3AR1Q16581 482 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 BATF2Q8N1L9 274 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 OR51H1Q8NH63 302 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 SCGB1C1Q8TD33 95 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 MBD3L1Q8WWY6 194 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 GALMQ96C23 342 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 ZNF488Q96MN9 340 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 PARP12Q9H0J9 701 aaKnown RBP10.53□□□□□ -0.72
PAAF1-215ENST00000544909 MAGT1Q9H0U3 335 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 DEFB127Q9H1M4 99 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 CACNG5Q9UF02 275 aa10.53□□□□□ -0.72
PAAF1-215ENST00000544909 TRAV17A0A0B4J275 112 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 ZNF98A6NK75 572 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 UBE2CO00762 179 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 HAND1O96004 215 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 RAB5AP20339 215 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 OMGP23515 440 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 HABP2Q14520 560 aaPredicted RBP10.52□□□□□ -0.73
PAAF1-215ENST00000544909 ATP6V1FQ16864 119 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 RNFT1Q5M7Z0 435 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 CENPVQ7Z7K6 275 aaPredicted RBP10.52□□□□□ -0.73
PAAF1-215ENST00000544909 FAM90A1Q86YD7 464 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 CLDND2Q8NHS1 167 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 SLC25A40Q8TBP6 338 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 IL1F10Q8WWZ1 152 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 SARAFQ96BY9 339 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 CXXC4Q9H2H0 198 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 TMEM242Q9NWH2 141 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 OR1A1Q9P1Q5 309 aa10.52□□□□□ -0.73
PAAF1-215ENST00000544909 METTL1Q9UBP6 276 aaKnown RBP10.52□□□□□ -0.73
PAAF1-215ENST00000544909 A0A0G2JRQ6 117 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 A0A1W2PR80 420 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 C5orf52A6NGY3 159 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 ARGFXA6NJG6 315 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 IGKV1-39P01597 117 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 IGKV1D-39P04432 117 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 SNRNP70P08621 437 aaKnown RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 SRP19P09132 144 aaKnown RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 P0C879 139 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 SMIM6P0DI80 62 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 NOVA1P51513 510 aaKnown RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 IDH3GP51553 393 aaPredicted RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 PSG7Q13046 419 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 ZNF585BQ52M93 769 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 DRAM1Q8N682 238 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 KLF14Q8TD94 323 aaPredicted RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 CIB3Q96Q77 187 aaPredicted RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 NIPSNAP3BQ9BS92 247 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 RBM7Q9Y580 266 aaKnown RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 MED13Q9UHV7 2174 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 PRR33A8MZF0 331 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 TNFSF12O43508 249 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 IGLV1-44P01699 117 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 P2RY6Q15077 328 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 EIF2S3LQ2VIR3 472 aaKnown RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 LRRC75BQ2VPJ9 315 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 SMIM21Q3B7S5 101 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 MBNL2Q5VZF2 373 aaKnown RBP10.51□□□□□ -0.73
PAAF1-215ENST00000544909 SLC25A24Q6NUK1 477 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 ZNF66Q6ZN08 573 aa10.51□□□□□ -0.73
PAAF1-215ENST00000544909 PIP4P1Q86T03 277 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms