RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 PRDX2P32119 198 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 ZCCHC14Q8WYQ9 949 aaKnown RBP9.11□□□□□ -0.95
PCDH9-204ENST00000544246 GPR82Q96P67 336 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 MARVELD1Q9BSK0 173 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 LINC00470Q9BZP3 86 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 TMEM56-RWDD3S4R434 201 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 C17orf51A8MQB3 221 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 TMEM262E9PQX1 116 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 FFAR1O14842 300 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 LEPROTL1O95214 131 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 CDKN2AP42771 156 aaKnown RBP9.11□□□□□ -0.95
PCDH9-204ENST00000544246 SOX8P57073 446 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 LAMTOR1Q6IAA8 161 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 SGMS2Q8NHU3 365 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 PHIPQ8WWQ0 1821 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 SCN9AQ15858 1988 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 CYB5R3P00387 301 aaPredicted RBP9.11□□□□□ -0.95
PCDH9-204ENST00000544246 B4GALNT1Q00973 533 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 LEMD1Q68G75 181 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 MDP1Q86V88 176 aa9.11□□□□□ -0.95
PCDH9-204ENST00000544246 ZNF71Q9NQZ8 489 aaPredicted RBP9.11□□□□□ -0.95
PCDH9-204ENST00000544246 CDIPTO14735 213 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 PPM1DO15297 605 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 ZNF205O95201 554 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 EML2O95834 649 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 IGF2P01344 180 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 CX3CL1P78423 397 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 CLN8Q9UBY8 286 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 TCHHQ07283 1943 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 TRBV5-4A0A0C4DH59 114 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 MPZL1O95297 269 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 MPLP40238 635 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 TEX30Q5JUR7 227 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 PWWP2BQ6NUJ5 590 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 DEFB124Q8NES8 71 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 PGLYRP4Q96LB8 373 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 PCGF1Q9BSM1 259 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 RTN4RQ9BZR6 473 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 WNT5BQ9H1J7 359 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 SLC25A10Q9UBX3 287 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-204ENST00000544246 CGB1A6NKQ9 187 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 RPL36A-HNRNPH2H7BZ11 118 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 TNFSF10P50591 281 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 KLF9Q13886 244 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-204ENST00000544246 PRICKLE4Q2TBC4 344 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 ZNF385CQ66K41 422 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-204ENST00000544246 OR10AC1Q8NH08 325 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 SOCS1O15524 211 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 GUSBP11Q6P575 273 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 RTN4RL1Q86UN2 441 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-204ENST00000544246 H1FOOQ8IZA3 346 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-204ENST00000544246 FAM216AQ8WUB2 273 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 SF3B5Q9BWJ5 86 aaKnown RBP9.1□□□□□ -0.95
PCDH9-204ENST00000544246 JKAMPQ9P055 326 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 CEACAM18A8MTB9 384 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 S1PR2O95136 353 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 CDS2O95674 445 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 SEC11BP0C7V7 166 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 PSG6Q00889 435 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 GAB4Q2WGN9 574 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 TMEM101Q96IK0 257 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 DUX5Q96PT3 197 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 FOXC2Q99958 501 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 PRSS27Q9BQR3 290 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 OPN4Q9UHM6 478 aa9.1□□□□□ -0.95
PCDH9-204ENST00000544246 ZNF107Q9UII5 783 aaPredicted RBP9.1□□□□□ -0.95
PCDH9-204ENST00000544246 C2CD4DB7Z1M9 353 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 BCL2P10415 239 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 FOLR2P14207 255 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 SPEM2Q0P670 501 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 RHBDD2Q6NTF9 364 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 TEX29Q8N6K0 151 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 OR52M1Q8NGK5 317 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 ZG16BQ96DA0 208 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 DIRC2Q96SL1 478 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 PXMP4Q9Y6I8 212 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 HMX2A2RU54 273 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 HPRT1P00492 218 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 FCGR2BP31994 310 aaPredicted RBP9.09□□□□□ -0.95
PCDH9-204ENST00000544246 SUMO2P61956 95 aaKnown RBP9.09□□□□□ -0.95
PCDH9-204ENST00000544246 ST6GAL2Q96JF0 529 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 VSTM2LQ96N03 204 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 MS4A5Q9H3V2 200 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 LPAR2Q9HBW0 351 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 IL36RNQ9UBH0 155 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 J3QT63 122 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 ZNF56Q15929 161 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 LYZL2Q7Z4W2 148 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 TINAGQ9UJW2 476 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 TIAM2Q8IVF5 1701 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 C1QTNF9BB2RNN3 333 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 HLA-DQA1P01909 254 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 HLA-DRB1P01911 266 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 FAM106CPP0CH98 169 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 TFF2Q03403 129 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 COL10A1Q03692 680 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 ADAD2Q8NCV1 583 aaKnown RBP9.09□□□□□ -0.95
PCDH9-204ENST00000544246 TMEM171Q8WVE6 324 aa9.09□□□□□ -0.95
PCDH9-204ENST00000544246 NPVFQ9HCQ7 196 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 272.5 ms