RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SSTR5P35346 364 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 DUX4L9Q6RFH8 374 aaPredicted RBP16.51■□□□□ 0.23
COPS7A-218ENST00000543939 C1orf87Q8N0U7 546 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 LGI3Q8N145 548 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 C18orf12Q96KH6 178 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 C2orf50Q96LR7 162 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 CCL13Q99616 98 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 TMEM106BQ9NUM4 274 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 DUX4Q9UBX2 424 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 KALRNO60229 2985 aa16.51■□□□□ 0.23
COPS7A-218ENST00000543939 PGLYRP1O75594 196 aaPredicted RBP16.5■□□□□ 0.23
COPS7A-218ENST00000543939 IGLV2-14P01704 120 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 GZMHP20718 246 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 SSTR2P30874 369 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 IL15RAQ13261 267 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 LRRC37A5PQ49AS3 106 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 C11orf87Q6NUJ2 197 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 TMEM65Q6PI78 240 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 OR52L2PQ8NGH6 319 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 ARL11Q969Q4 196 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 FAM234AQ9H0X4 552 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 RELNP78509 3460 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 TRAV38-1A0A0B4J264 116 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 SIGLEC5O15389 551 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 ARPC5O15511 151 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 MPC2O95563 127 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 GGNBP1Q5YKI7 109 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 LHFPL5Q8TAF8 219 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 GPHA2Q96T91 129 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 TMEM222Q9H0R3 208 aa16.5■□□□□ 0.23
COPS7A-218ENST00000543939 PPIAL4EA0A075B759 164 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 PPIAL4DF5H284 164 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 L7N2F9 121 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 SPINT2O43291 252 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 IFNA21P01568 189 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 PPIAL4FP0DN26 164 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 PSMB6P28072 239 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 EDDM3BP56851 147 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 HTD2P86397 168 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 GNMTQ14749 295 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 FAM216BQ8N7L0 139 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 CCL17Q92583 94 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 C14orf79Q96F83 325 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 AKR1E2Q96JD6 320 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 HEXA-AS1Q9H8Q6 139 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 PPIAL4AQ9Y536 164 aa16.49■□□□□ 0.23
COPS7A-218ENST00000543939 MEX3AA1L020 520 aaKnown RBP16.48■□□□□ 0.23
COPS7A-218ENST00000543939 WNT2P09544 360 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 OR8U9P0C7N5 309 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 RPA2P15927 270 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 S100GP29377 79 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 SRPXP78539 464 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 FAM53AQ6NSI3 398 aaPredicted RBP16.48■□□□□ 0.23
COPS7A-218ENST00000543939 LYZL2Q7Z4W2 148 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 OR8U1Q8NH10 309 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 RFESDQ8TAC1 157 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 TMEM56Q96MV1 263 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 OR6C3Q9NZP0 311 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 FBXO9Q9UK97 447 aaPredicted RBP16.48■□□□□ 0.23
COPS7A-218ENST00000543939 UBE2J1Q9Y385 318 aaPredicted RBP16.48■□□□□ 0.23
COPS7A-218ENST00000543939 RBM7Q9Y580 266 aaKnown RBP16.48■□□□□ 0.23
COPS7A-218ENST00000543939 TMEM56-RWDD3S4R434 201 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 NKX6-3A6NJ46 265 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 TNFSF12O43508 249 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 TSC22D2O75157 780 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 CGB3P0DN86 165 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 CGB7P0DN87 165 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 UCP1P25874 307 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 ZNF546Q86UE3 836 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 NINJ1Q92982 152 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 OR2S2Q9NQN1 319 aa16.48■□□□□ 0.23
COPS7A-218ENST00000543939 USP24Q9UPU5 2620 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 SPTBN1Q01082 2364 aaKnown RBP16.47■□□□□ 0.23
COPS7A-218ENST00000543939 IGHV1-69-2A0A0G2JMI3 117 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 H0Y980 276 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 TNFRSF13BO14836 293 aaPredicted RBP16.47■□□□□ 0.23
COPS7A-218ENST00000543939 F2RP25116 425 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 PPP1CCP36873 323 aaKnown RBP16.47■□□□□ 0.23
COPS7A-218ENST00000543939 PPOXP50336 477 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 OPCMLQ14982 345 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 IAH1Q2TAA2 248 aaPredicted RBP16.47■□□□□ 0.23
COPS7A-218ENST00000543939 MEX3BQ6ZN04 569 aaKnown RBP16.47■□□□□ 0.23
COPS7A-218ENST00000543939 THAP6Q8TBB0 222 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 TNFSF18Q9UNG2 199 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 ABCA4P78363 2273 aa16.47■□□□□ 0.23
COPS7A-218ENST00000543939 CACNA1BQ00975 2339 aa16.46■□□□□ 0.23
COPS7A-218ENST00000543939 C4BPBP20851 252 aa16.46■□□□□ 0.23
COPS7A-218ENST00000543939 IGSF10Q6WRI0 2623 aa16.46■□□□□ 0.23
COPS7A-218ENST00000543939 RNF126Q9BV68 326 aa16.46■□□□□ 0.23
COPS7A-218ENST00000543939 MFFQ9GZY8 342 aa16.46■□□□□ 0.23
COPS7A-218ENST00000543939 MBD2Q9UBB5 411 aa16.46■□□□□ 0.23
COPS7A-218ENST00000543939 KCNS2Q9ULS6 477 aa16.46■□□□□ 0.23
COPS7A-218ENST00000543939 IGHV3-43A0A0B4J1X8 118 aa16.45■□□□□ 0.22
COPS7A-218ENST00000543939 H0YIZ8 118 aa16.45■□□□□ 0.22
COPS7A-218ENST00000543939 F2RL2O00254 374 aa16.45■□□□□ 0.22
COPS7A-218ENST00000543939 B3GALNT1O75752 331 aa16.45■□□□□ 0.22
COPS7A-218ENST00000543939 CDS2O95674 445 aa16.45■□□□□ 0.22
COPS7A-218ENST00000543939 IGHV3-43DP0DP04 118 aa16.45■□□□□ 0.22
COPS7A-218ENST00000543939 TMEM268Q5VZI3 342 aa16.45■□□□□ 0.22
COPS7A-218ENST00000543939 TMUB2Q71RG4 321 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms