RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 PSG2P11465 335 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 GNG3P63215 75 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 OR2T2Q6IF00 324 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 PPP1R32Q7Z5V6 425 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 ZNF383Q8NA42 475 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 OR10D4PQ8NGN7 298 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 HS3ST6Q96QI5 342 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 PSENENQ9NZ42 101 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 PITPNC1Q9UKF7 332 aa11.68□□□□□ -0.54
VPS33A-208ENST00000543633 PHOX2AO14813 284 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 GDF9O60383 454 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 TRAPPC6AO75865 159 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 TRGC1P0CF51 173 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 SP9P0CG40 484 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 DEFA6Q01524 100 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 ZNF726P1Q15940 193 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 CDCP2Q5VXM1 449 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 P4HA3Q7Z4N8 544 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 ZNF845Q96IR2 970 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-208ENST00000543633 PRDM13Q9H4Q3 707 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 ZNF665Q9H7R5 613 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 CDH20Q9HBT6 801 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 LRFN1Q9P244 771 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 IL36RNQ9UBH0 155 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 CACNG5Q9UF02 275 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 OR14J1Q9UGF5 321 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 KMT2EQ8IZD2 1858 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 TRBV23-1A0A0A0MS06 115 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 TRAV24A0A0B4J272 114 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 C5orf49A4QMS7 147 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 ANKRD30BLA7E2S9 258 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 PATE3B3GLJ2 98 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 B4E171 279 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 TNFSF12O43508 249 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 SYNGR1O43759 233 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 SOD3P08294 240 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 TSPAN7P41732 249 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 CYP2G1PQ6ZSU1 146 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 CENPVQ7Z7K6 275 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-208ENST00000543633 TGIF2LYQ8IUE0 185 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 FAM58AQ8N1B3 248 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 BATF2Q8N1L9 274 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 OR51H1Q8NH63 302 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 OR5R1Q8NH85 324 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 GPHA2Q96T91 129 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 PYGO2Q9BRQ0 406 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 RSG1Q9BU20 258 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
VPS33A-208ENST00000543633 CRIM1Q9NZV1 1036 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 NAT8Q9UHE5 227 aa11.67□□□□□ -0.54
VPS33A-208ENST00000543633 ZFP92A6NM28 416 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 RNF212BA8MTL3 300 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 J3QT63 122 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 NXPH3O95157 252 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 IGKV1-39P01597 117 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 IGKV1D-39P04432 117 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 SERPINA7P05543 415 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 CCL4P13236 92 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 CYB561P49447 251 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 LILRB2Q8N423 598 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 FRZBQ92765 325 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 POM121L2Q96KW2 1035 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 SRD5A3Q9H8P0 318 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 TMEM9BQ9NQ34 198 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 DEPPQ9NTK1 212 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 DLL3Q9NYJ7 618 aa11.66□□□□□ -0.54
VPS33A-208ENST00000543633 ERRFI1Q9UJM3 462 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-208ENST00000543633 MAP1LC3B2A6NCE7 125 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 TMEM250H0YL14 139 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 H3BP45 60 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 PKIAP61925 76 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 Q0VFX4 171 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 WDR25Q64LD2 544 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-208ENST00000543633 ZNF600Q6ZNG1 722 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 C20orf204Q6ZNR8 217 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 HAPLN4Q86UW8 402 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 Q8IYB0 196 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 ABHD5Q8WTS1 349 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 GPR61Q9BZJ8 451 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 MAP1LC3BQ9GZQ8 125 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 ZNF552Q9H707 407 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-208ENST00000543633 HSPB6O14558 160 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 SYNGR4O95473 234 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 IGKV1-5P01602 117 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 HLA-HP01893 362 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 CFIP05156 583 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 PLP2Q04941 152 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 ATP6V1FQ16864 119 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 COA6Q5JTJ3 125 aaKnown RBP11.65□□□□□ -0.54
VPS33A-208ENST00000543633 SLC23A3Q6PIS1 610 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 Q6ZRM9 215 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 RNASEH2CQ8TDP1 164 aaKnown RBP11.65□□□□□ -0.54
VPS33A-208ENST00000543633 TAF15Q92804 592 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS33A-208ENST00000543633 B4GALT7Q9UBV7 327 aa11.65□□□□□ -0.54
VPS33A-208ENST00000543633 J3QW42 95 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 IGLV2-14P01704 120 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 METTL15P1P0C7V9 234 aa11.64□□□□□ -0.55
VPS33A-208ENST00000543633 LHX2P50458 406 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms