RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 GPR146Q96CH1 333 aa12.13□□□□□ -0.47
PRAME-214ENST00000543184 OPA3Q9H6K4 179 aa12.13□□□□□ -0.47
PRAME-214ENST00000543184 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
PRAME-214ENST00000543184 ZNF705GA8MUZ8 300 aaPredicted RBP12.12□□□□□ -0.47
PRAME-214ENST00000543184 ZNF732B4DXR9 585 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 CNOT4O95628 575 aaKnown RBP12.12□□□□□ -0.47
PRAME-214ENST00000543184 RFPL3SP0C7P2 107 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 TLE4Q04727 773 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 ADIRFQ15847 76 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 EXT1Q16394 746 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 SP5Q6BEB4 398 aaPredicted RBP12.12□□□□□ -0.47
PRAME-214ENST00000543184 GATAD1Q8WUU5 269 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 ZNF845Q96IR2 970 aaPredicted RBP12.12□□□□□ -0.47
PRAME-214ENST00000543184 TMEM56Q96MV1 263 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 ATP5SQ99766 215 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 CABLES2Q9BTV7 478 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 ELOVL1Q9BW60 279 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 TMEM38BQ9NVV0 291 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 TMEM56-RWDD3S4R434 201 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 A0A087WWC5 75 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 BTBD17A6NE02 478 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 LIFP15018 202 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 FOXG1P55316 489 aaPredicted RBP12.12□□□□□ -0.47
PRAME-214ENST00000543184 UCP3P55916 312 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 TAS2R30P59541 319 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 P2RY6Q15077 328 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 TESK1Q15569 626 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 OR56B2PQ8NGI1 322 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 ABHD3Q8WU67 409 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 AURKAIP1Q9NWT8 199 aaPredicted RBP12.12□□□□□ -0.47
PRAME-214ENST00000543184 RNF115Q9Y4L5 304 aa12.12□□□□□ -0.47
PRAME-214ENST00000543184 NBASA2RRP1 2371 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 COL27A1Q8IZC6 1860 aaPredicted RBP12.11□□□□□ -0.47
PRAME-214ENST00000543184 LOC102725191A0A1B0GVB3 256 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 TP53I11O14683 189 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 SYNGR1O43759 233 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 PGLYRP1O75594 196 aaPredicted RBP12.11□□□□□ -0.47
PRAME-214ENST00000543184 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
PRAME-214ENST00000543184 FUT6P51993 359 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 AAED1Q7RTV5 226 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 C1orf87Q8N0U7 546 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 OR4X1Q8NH49 305 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 CT55Q8WUE5 264 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
PRAME-214ENST00000543184 RPUSD4Q96CM3 377 aaKnown RBP12.11□□□□□ -0.47
PRAME-214ENST00000543184 CACNA1AO00555 2505 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 TRAPPC6AO75865 159 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 USF2Q15853 346 aaPredicted RBP12.11□□□□□ -0.47
PRAME-214ENST00000543184 TMEM211Q6ICI0 200 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 GNPNAT1Q96EK6 184 aaPredicted RBP12.11□□□□□ -0.47
PRAME-214ENST00000543184 FOXB1Q99853 325 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 ATG101Q9BSB4 218 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 RBKSQ9H477 322 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 Q9N2K0 584 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 PPP1R3CQ9UQK1 317 aa12.11□□□□□ -0.47
PRAME-214ENST00000543184 DOCK10Q96BY6 2186 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 RPL36A-HNRNPH2H7BZ11 118 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 ST8SIA5O15466 376 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 KLF7O75840 302 aaPredicted RBP12.1□□□□□ -0.47
PRAME-214ENST00000543184 VDAC1P21796 283 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 COL10A1Q03692 680 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 PCOLCEQ15113 449 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 C6orf15Q6UXA7 325 aaPredicted RBP12.1□□□□□ -0.47
PRAME-214ENST00000543184 Q6ZSR3 168 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 SLC35E3Q7Z769 313 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 ZDHHC23Q8IYP9 409 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 CA5BP1Q8WTZ4 195 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 OR1A1Q9P1Q5 309 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 ERRFI1Q9UJM3 462 aaPredicted RBP12.1□□□□□ -0.47
PRAME-214ENST00000543184 KIAA1549Q9HCM3 1950 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 SMCO3A2RU48 225 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 CLDN34H7C241 214 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 GZMHP20718 246 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 TMEM42Q69YG0 159 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 CYB5R2Q6BCY4 276 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 FAM53AQ6NSI3 398 aaPredicted RBP12.1□□□□□ -0.47
PRAME-214ENST00000543184 HAPLN4Q86UW8 402 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 CACNG5Q9UF02 275 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 BSNQ9UPA5 3926 aa12.1□□□□□ -0.47
PRAME-214ENST00000543184 MED12LQ86YW9 2145 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 A0A1B0GU03 582 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 LILRA1O75019 489 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 IFNA5P01569 189 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 UMODP07911 640 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 BCL2P10415 239 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 SRYQ05066 204 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 Q3ZCU0 254 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 WIPI1Q5MNZ9 446 aaPredicted RBP12.09□□□□□ -0.47
PRAME-214ENST00000543184 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 THOC3Q96J01 351 aaKnown RBP12.09□□□□□ -0.47
PRAME-214ENST00000543184 LAMP3Q9UQV4 416 aa12.09□□□□□ -0.47
PRAME-214ENST00000543184 USF3Q68DE3 2245 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms