RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 VENTXO95231 258 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 DTYMKP23919 212 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 GNG2P59768 71 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 BAMBIQ13145 260 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 SRSF7Q16629 238 aaKnown RBP eCLIP13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 FAM53AQ6NSI3 398 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 IZUMO1Q8IYV9 350 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 ZDHHC22Q8N966 263 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 C8orf31Q8N9H6 132 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 OR52L2PQ8NGH6 319 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 MMP28Q9H239 520 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 ESM1Q9NQ30 184 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 DPM3Q9P2X0 92 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 JPT1Q9UK76 154 aa13.87□□□□□ -0.19
RABGGTA-203ENST00000543002 SMIM31A0A1B0GVY4 71 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 BUB1B-PAK6H3BSN5 160 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 SCTP09683 121 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 ELK1P19419 428 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 MNDAP41218 407 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 GNG10P50151 68 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 MORN2Q502X0 79 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 TMEM69Q5SWH9 247 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 STEAP3Q658P3 488 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 Q6ZS49 121 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 LINC00311Q8N616 119 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 OR10V1Q8NGI7 309 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 NUDCD2Q8WVJ2 157 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 CREB3L1Q96BA8 519 aa13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 ZNF230Q9UIE0 474 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 AMMECR1Q9Y4X0 333 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-203ENST00000543002 DNAJC9-AS1A6NH13 148 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 LEUTXA8MZ59 168 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 HOXA3O43365 443 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 SSX5O60225 188 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 YPEL1O60688 119 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 KIR2DS4P43632 304 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 IER3P46695 156 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 TAS2R20P59543 309 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 GNMTQ14749 295 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 KIR2DS1Q14954 304 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 SSX2Q16385 188 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 LY6G6FQ5SQ64 297 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 DYNAPQ8N1N2 210 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 DTX3Q8N9I9 347 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 ZNF439Q8NDP4 499 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 SSMEM1Q8WWF3 244 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 IL1F10Q8WWZ1 152 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 YPEL2Q96QA6 119 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 SLIRPQ9GZT3 109 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 NDUFA13Q9P0J0 144 aa13.85□□□□□ -0.19
RABGGTA-203ENST00000543002 A0A1W2PPE3 182 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 LY6LH3BQJ8 138 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 CLDN34H7C241 214 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 FABP7O15540 132 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 RGS11O94810 467 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 PAX6P26367 422 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 PPP1CCP36873 323 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 CEACAM3P40198 252 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 SLC9A3R2Q15599 337 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 AANATQ16613 207 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 SLC25A48Q6ZT89 311 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 TMEM86BQ8N661 226 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 OR4A4PQ8NGN8 299 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 MAFIPQ8WZ33 124 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 OCSTAMPQ9BR26 566 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 DPAGT1Q9H3H5 408 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 HILPDAQ9Y5L2 63 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 POMT1Q9Y6A1 747 aa13.84□□□□□ -0.19
RABGGTA-203ENST00000543002 IGKV1-6A0A0C4DH72 117 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 DPPA5A6NC42 116 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 VGLL3A8MV65 326 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 FAM25AB3EWG3 89 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 FAM25CB3EWG5 89 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 FAM25GB3EWG6 89 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 CTDSP2O14595 271 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 IGHV4-59P01825 116 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 HLA-DQB1P01920 261 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 GSTT2P0CG29 244 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 GSTT2BP0CG30 244 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 PTHLHP12272 177 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 ZNF134P52741 427 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 UBA52P62987 128 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 SRSF2Q01130 221 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 LRRC75BQ2VPJ9 315 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 CT45A1Q5HYN5 189 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 TPTE2P1Q5T6R2 138 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 OR10X1Q8NGY0 326 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 CT45A3Q8NHU0 189 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 DGCR14Q96DF8 476 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 DUX5Q96PT3 197 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 ST6GALNAC5Q9BVH7 336 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 MIXL1Q9H2W2 232 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 SLC23A1Q9UHI7 598 aa13.83□□□□□ -0.2
RABGGTA-203ENST00000543002 CUBNO60494 3623 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 IGKV1D-8A0A087WSZ0 117 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 OOSP1A8MZH6 123 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 TRIM77I1YAP6 450 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 SLC31A2O15432 143 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 RGS5O15539 181 aa13.82□□□□□ -0.2
RABGGTA-203ENST00000543002 DIRAS3O95661 229 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms