RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 PTBP1P26599 531 aaKnown RBP eCLIP9.47□□□□□ -0.89
YBX3-213ENST00000542641 LOXL3P58215 753 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 ARPC4P59998 168 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 DGCR2P98153 550 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 KLRD1Q13241 179 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 PYDC2Q56P42 97 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 IGSF11Q5DX21 431 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 GPR157Q5UAW9 335 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 STEAP3Q658P3 488 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 IL17RELQ6ZVW7 336 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 ABHD12Q8N2K0 398 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 PNKDQ8N490 385 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 OR52L2PQ8NGH6 319 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 TMEM160Q9NX00 188 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 GFOD1Q9NXC2 390 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 KLK11Q9UBX7 282 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 ANXA10Q9UJ72 324 aa9.47□□□□□ -0.89
YBX3-213ENST00000542641 KIAA2026Q5HYC2 2103 aa9.46□□□□□ -0.89
YBX3-213ENST00000542641 A0A087X0M5 115 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 IGHV2-26A0A0B4J1V2 119 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 IGHV1-69DA0A0B4J2H0 117 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 A0A1B0GX30 115 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 A0A1W2PRD5 423 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 A0A1W2PRF3 423 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 A0A1W2PRM7 423 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 TOR1AO14656 332 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 BET1O15155 118 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 HSPA12AO43301 675 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 IGHV1-69P01742 117 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 IGHV3-7P01780 117 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 CTXN2P0C2S0 81 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 IGHV4-38-2P0DP08 117 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 ZBTB25P24278 435 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 RCVRNP35243 200 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 SRP14P37108 136 aaKnown RBP9.46□□□□□ -0.9
YBX3-213ENST00000542641 UBE2E1P51965 193 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 RELBQ01201 579 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 CHRFAM7AQ494W8 412 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 OXLD1Q5BKU9 147 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 KLF17Q5JT82 389 aaPredicted RBP9.46□□□□□ -0.9
YBX3-213ENST00000542641 HCP5Q6MZN7 132 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 FAM53AQ6NSI3 398 aaPredicted RBP9.46□□□□□ -0.9
YBX3-213ENST00000542641 OR10V1Q8NGI7 309 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 SMIM4Q8WVI0 70 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 SNAPC3Q92966 411 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 LEAP2Q969E1 77 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 CLEC7AQ9BXN2 247 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 BEX2Q9BXY8 128 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 MTFP1Q9UDX5 166 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 SLC23A1Q9UHI7 598 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 JPT1Q9UK76 154 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 DSCAML1Q8TD84 2053 aa9.46□□□□□ -0.9
YBX3-213ENST00000542641 WNK2Q9Y3S1 2297 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 TRBV6-7A0A0A0MS04 114 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 IGKV1-6A0A0C4DH72 117 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 GSTZ1O43708 216 aaPredicted RBP9.45□□□□□ -0.9
YBX3-213ENST00000542641 YPEL1O60688 119 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 RGS11O94810 467 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 ARG1P05089 322 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 NAT1P18440 290 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 HLA-DMAP28067 261 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 CD34P28906 385 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 PPP1CCP36873 323 aaKnown RBP9.45□□□□□ -0.9
YBX3-213ENST00000542641 CEACAM6P40199 344 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 GNG10P50151 68 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 PRRX1P54821 245 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 ACTBP60709 375 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 ACTG1P63261 375 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 ZNF45Q02386 682 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 GNMTQ14749 295 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 HERPUD1Q15011 391 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 ZNF79Q15937 498 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 MORN2Q502X0 79 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 UTF1Q5T230 341 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 LYSMD2Q8IV50 215 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 Q8N402 240 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 OR11H6Q8NGC7 330 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 OR5AP2Q8NGF4 316 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 OR9G1Q8NH87 305 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 OR10J5Q8NHC4 309 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 YPEL2Q96QA6 119 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 GINS4Q9BRT9 223 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 CABLES2Q9BTV7 478 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 OR1A1Q9P1Q5 309 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 CDC42EP3Q9UKI2 254 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 NUP50Q9UKX7 468 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 ANAPC10Q9UM13 185 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 PSG11Q9UQ72 335 aa9.45□□□□□ -0.9
YBX3-213ENST00000542641 A0A1W2PPE3 182 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 INAFM1C9JVW0 142 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 J3QR06 171 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 NPFFO15130 113 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 DIRAS3O95661 229 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 FSHBP01225 129 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 PMP2P02689 132 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 OR3A3P47888 321 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 LGALS4P56470 323 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 TAS2R46P59540 309 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 BPIFB3P59826 476 aa9.44□□□□□ -0.9
YBX3-213ENST00000542641 SSBP1Q04837 148 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms