RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CTSDP07339 412 aaPredicted RBP23.02■■□□□ 1.28
CCM2-218ENST00000541586 SULT1A3P0DMM9 295 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 SULT1A4P0DMN0 295 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 EDDM3BP56851 147 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 TMEM128Q5BJH2 165 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 ZFAND1Q8TCF1 268 aa23.02■■□□□ 1.28
CCM2-218ENST00000541586 RANGRFQ9HD47 186 aaPredicted RBP23.02■■□□□ 1.28
CCM2-218ENST00000541586 KIAA2026Q5HYC2 2103 aa23.01■■□□□ 1.27
CCM2-218ENST00000541586 FAM172BPA6NC97 362 aa23.01■■□□□ 1.27
CCM2-218ENST00000541586 TNFRSF13BO14836 293 aaPredicted RBP23.01■■□□□ 1.27
CCM2-218ENST00000541586 UCP3P55916 312 aa23.01■■□□□ 1.27
CCM2-218ENST00000541586 UBE2MP61081 183 aaKnown RBP23.01■■□□□ 1.27
CCM2-218ENST00000541586 DHODHQ02127 395 aa23.01■■□□□ 1.27
CCM2-218ENST00000541586 LYG2Q86SG7 212 aa23.01■■□□□ 1.27
CCM2-218ENST00000541586 H1FOOQ8IZA3 346 aaPredicted RBP23.01■■□□□ 1.27
CCM2-218ENST00000541586 OR1L1Q8NH94 360 aa23.01■■□□□ 1.27
CCM2-218ENST00000541586 MEX3AA1L020 520 aaKnown RBP23■■□□□ 1.27
CCM2-218ENST00000541586 C9orf170A2RU37 121 aa23■■□□□ 1.27
CCM2-218ENST00000541586 HBZP02008 142 aa23■■□□□ 1.27
CCM2-218ENST00000541586 CXCL3P19876 107 aa23■■□□□ 1.27
CCM2-218ENST00000541586 IGHV2-70P01814 119 aa22.99■■□□□ 1.27
CCM2-218ENST00000541586 VAMP1P23763 118 aa22.99■■□□□ 1.27
CCM2-218ENST00000541586 ERP29P30040 261 aaKnown RBP22.99■■□□□ 1.27
CCM2-218ENST00000541586 TRAT1Q6PIZ9 186 aa22.99■■□□□ 1.27
CCM2-218ENST00000541586 GALMQ96C23 342 aa22.99■■□□□ 1.27
CCM2-218ENST00000541586 FYTTD1Q96QD9 318 aaKnown RBP22.99■■□□□ 1.27
CCM2-218ENST00000541586 NCOR1P1Q9H4R4 102 aa22.99■■□□□ 1.27
CCM2-218ENST00000541586 SSTR5P35346 364 aa22.99■■□□□ 1.27
CCM2-218ENST00000541586 SLC38A6Q8IZM9 456 aa22.99■■□□□ 1.27
CCM2-218ENST00000541586 TMEM246Q9BRR3 403 aa22.99■■□□□ 1.27
CCM2-218ENST00000541586 MYO9AB2RTY4 2548 aa22.98■■□□□ 1.27
CCM2-218ENST00000541586 VWC2LB2RUY7 222 aa22.98■■□□□ 1.27
CCM2-218ENST00000541586 RNF223E7ERA6 249 aa22.98■■□□□ 1.27
CCM2-218ENST00000541586 HSPA12AO43301 675 aa22.98■■□□□ 1.27
CCM2-218ENST00000541586 CR1LQ2VPA4 569 aa22.98■■□□□ 1.27
CCM2-218ENST00000541586 UXS1Q8NBZ7 420 aa22.98■■□□□ 1.27
CCM2-218ENST00000541586 OR2W1Q9Y3N9 320 aa22.98■■□□□ 1.27
CCM2-218ENST00000541586 ZNF469Q96JG9 3925 aaPredicted RBP22.97■■□□□ 1.27
CCM2-218ENST00000541586 IGKV1D-13A0A0B4J2D9 117 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 HEXAP06865 529 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 IGKV1-13P0DP09 117 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 SLC25A16P16260 332 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 IL2RGP31785 369 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 SUPT4H1P63272 117 aaKnown RBP22.97■■□□□ 1.27
CCM2-218ENST00000541586 KCNJ8Q15842 424 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 LYPD2Q6UXB3 125 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 FGFRL1Q8N441 504 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 C12orf45Q8N5I9 185 aaPredicted RBP22.97■■□□□ 1.27
CCM2-218ENST00000541586 ZNF565Q8N9K5 539 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 MAPK1IP1LQ8NDC0 245 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 ARL11Q969Q4 196 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 RSRP1Q9BUV0 290 aa22.97■■□□□ 1.27
CCM2-218ENST00000541586 C15orf65H3BRN8 121 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 ADAM20O43506 726 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 RPS2P15880 293 aaKnown RBP22.96■■□□□ 1.27
CCM2-218ENST00000541586 GZMHP20718 246 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 SECTM1Q8WVN6 248 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 REG4Q9BYZ8 158 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 OR6C3Q9NZP0 311 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 SLC25A10Q9UBX3 287 aaPredicted RBP22.96■■□□□ 1.27
CCM2-218ENST00000541586 OPN4Q9UHM6 478 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 IGHV4-61A0A0C4DH41 118 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 CEACAM6P40199 344 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 PIGPP57054 158 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 ABCA11PQ4W5N1 156 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 SPICQ8N5J4 248 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 OR2AK2Q8NG84 335 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 RFESDQ8TAC1 157 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 CASTOR1Q8WTX7 329 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 MITD1Q8WV92 249 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 RDH8Q9NYR8 311 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 MGAT4CQ9UBM8 478 aa22.96■■□□□ 1.27
CCM2-218ENST00000541586 SPINT2O43291 252 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 NDUFA2O43678 99 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 FCN3O75636 299 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 SFT2D2O95562 160 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 DUS4LO95620 317 aaKnown RBP22.95■■□□□ 1.26
CCM2-218ENST00000541586 FSTL3O95633 263 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 NDUFB7P17568 137 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 GNRHRP30968 328 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 PHLDA2Q53GA4 152 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 LPCAT3Q6P1A2 487 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 LDLRAD3Q86YD5 345 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 KAAG1Q9UBP8 84 aa22.95■■□□□ 1.26
CCM2-218ENST00000541586 CD34P28906 385 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 C2orf68Q2NKX9 166 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 OR52L2PQ8NGH6 319 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 DMRTB1Q96MA1 342 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 SLC5A7Q9GZV3 580 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 SLC2A9Q9NRM0 540 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 CTSZQ9UBR2 303 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 TEX15Q9BXT5 2789 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 CRYM-AS1A6NIL9 109 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 USF1P22415 310 aaPredicted RBP22.94■■□□□ 1.26
CCM2-218ENST00000541586 SLC9A3R2Q15599 337 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 TCTE3Q8IZS6 198 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 ZNF486Q96H40 463 aaPredicted RBP22.94■■□□□ 1.26
CCM2-218ENST00000541586 PHB2Q99623 299 aa22.94■■□□□ 1.26
CCM2-218ENST00000541586 PARP12Q9H0J9 701 aaKnown RBP22.94■■□□□ 1.26
CCM2-218ENST00000541586 CGB3P0DN86 165 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms