RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 LRRC3CA6NJW4 275 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 CBR3O75828 277 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 CFIP05156 583 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 MLF1P58340 268 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 COL10A1Q03692 680 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 WDR5BQ86VZ2 330 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 C1orf87Q8N0U7 546 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 OR4X1Q8NH49 305 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 MRPL30Q8TCC3 161 aaKnown RBP8.81□□□□□ -1
CDC42SE1-207ENST00000540998 CPT1CQ8TCG5 803 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 DNASE2BQ8WZ79 361 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 GNPNAT1Q96EK6 184 aaPredicted RBP8.81□□□□□ -1
CDC42SE1-207ENST00000540998 LAMP3Q9UQV4 416 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 A0A087WZY1 265 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 TRAV24A0A0B4J272 114 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 SIRPB1O00241 398 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 TUSC2O75896 110 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 IFNA5P01569 189 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 SELLP14151 372 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 PMP22Q01453 160 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 TRIM61Q5EBN2 209 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 LILRB2Q8N423 598 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 IFI44Q8TCB0 444 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 OR4C12Q96R67 309 aa8.81□□□□□ -1
CDC42SE1-207ENST00000540998 DMXL1Q9Y485 3027 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 A0A087WWC5 75 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 ZNF705GA8MUZ8 300 aaPredicted RBP8.8□□□□□ -1
CDC42SE1-207ENST00000540998 GATCO43716 136 aaKnown RBP8.8□□□□□ -1
CDC42SE1-207ENST00000540998 IGLV2-14P01704 120 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 DDTP30046 118 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 SSX9Q7RTT3 188 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 C16orf82Q7Z2V1 217 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 MRPL21Q7Z2W9 205 aaKnown RBP8.8□□□□□ -1
CDC42SE1-207ENST00000540998 SLC35E3Q7Z769 313 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 TUSC5Q8IXB3 177 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 ZNF525Q8N782 197 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 OR5P3Q8WZ94 311 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 MISP3Q96FF7 219 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 UNKLQ9H9P5 680 aaKnown RBP8.8□□□□□ -1
CDC42SE1-207ENST00000540998 PSENENQ9NZ42 101 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 CEP250Q9BV73 2442 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 CADP27708 2225 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 TRAPPC2LH3BP13 241 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 AGBL5Q8NDL9 886 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 OR10V1Q8NGI7 309 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 TMEM37Q8WXS4 190 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 PLPPR2Q96GM1 343 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 THOC3Q96J01 351 aaKnown RBP8.8□□□□□ -1
CDC42SE1-207ENST00000540998 SH2D2AQ9NP31 389 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 IL36GQ9NZH8 169 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 CACNA1GO43497 2377 aa8.8□□□□□ -1
CDC42SE1-207ENST00000540998 ATMQ13315 3056 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 A0A1W2PPQ1 181 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 MAP1LC3B2A6NCE7 125 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 FAM166BA8MTA8 275 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 RAMP3O60896 148 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 P04436 131 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 CD33P20138 364 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 CA6P23280 308 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 FGF12P61328 243 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 ZNF324BQ6AW86 544 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-207ENST00000540998 OR2V1Q8NHB1 315 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 OR10J5Q8NHC4 309 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 SCGB1C1Q8TD33 95 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 SAP25Q8TEE9 199 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 CLDN23Q96B33 292 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 SMIM7Q9BQ49 75 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 ATG101Q9BSB4 218 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 PCGF1Q9BSM1 259 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 MAP1LC3BQ9GZQ8 125 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 SDF2L1Q9HCN8 221 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 ATP23Q9Y6H3 246 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 PGPEP1LA6NFU8 196 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 H0Y980 276 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 CLDN34H7C241 214 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 AMBPP02760 352 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 CD81P60033 236 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 SRPXP78539 464 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 IL24Q13007 206 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 KRTAP27-1Q3LI81 207 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 ZNF808Q8N4W9 903 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-207ENST00000540998 RPP25LQ8N5L8 163 aaKnown RBP8.79□□□□□ -1
CDC42SE1-207ENST00000540998 OR5D13Q8NGL4 314 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 PSMF1Q92530 271 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 TMEM204Q9BSN7 226 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 PLSCR2Q9NRY7 297 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 NOSIPQ9Y314 301 aaKnown RBP8.79□□□□□ -1
CDC42SE1-207ENST00000540998 BTBD17A6NE02 478 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 YKT6O15498 198 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 SYNGR2O43760 224 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 PTBP3O95758 552 aaKnown RBP8.79□□□□□ -1
CDC42SE1-207ENST00000540998 COL19A1Q14993 1142 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 ACSM6Q6P461 480 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 FIP1L1Q6UN15 594 aaKnown RBP8.79□□□□□ -1
CDC42SE1-207ENST00000540998 PHF7Q9BWX1 381 aaPredicted RBP8.79□□□□□ -1
CDC42SE1-207ENST00000540998 C1QTNF5Q9BXJ0 243 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 C12orf49Q9H741 205 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 CLN8Q9UBY8 286 aa8.79□□□□□ -1
CDC42SE1-207ENST00000540998 PCSK5Q92824 1860 aa8.78□□□□□ -1
CDC42SE1-207ENST00000540998 LOC102723996A0A087X1L8 192 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms