RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 LEUTXA8MZ59 168 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 RGS5O15539 181 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 IGLV1-47P01700 117 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 SCTP09683 121 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 DTYMKP23919 212 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 GNG10P50151 68 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 SRSF7Q16629 238 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDB1-218ENST00000540784 LHFPL4Q7Z7J7 247 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 PRIMA1Q86XR5 153 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 OR52L2PQ8NGH6 319 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 C17orf50Q8WW18 174 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 AJUBAQ96IF1 538 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 MEGF9Q9H1U4 602 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 DPM3Q9P2X0 92 aa12.58□□□□□ -0.4
DDB1-218ENST00000540784 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
DDB1-218ENST00000540784 BUB1B-PAK6H3BSN5 160 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 CTDSP2O14595 271 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 RGS11O94810 467 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 CEACAM3P40198 252 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 KIR2DS4P43632 304 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 TAS2R20P59543 309 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 HILS1P60008 231 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 HLA-DRB3P79483 266 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 KIR2DS1Q14954 304 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 SSX2Q16385 188 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 Q3ZCU0 254 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 MORN2Q502X0 79 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 STEAP3Q658P3 488 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 FAM53AQ6NSI3 398 aaPredicted RBP12.57□□□□□ -0.4
DDB1-218ENST00000540784 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 OR4P4Q8NGL7 312 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 OR10X1Q8NGY0 326 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 NUDCD2Q8WVJ2 157 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 MMP28Q9H239 520 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 JPT1Q9UK76 154 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 AMMECR1Q9Y4X0 333 aaPredicted RBP12.57□□□□□ -0.4
DDB1-218ENST00000540784 NF1P21359 2839 aa12.57□□□□□ -0.4
DDB1-218ENST00000540784 A0A1W2PPE3 182 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 FABP7O15540 132 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 HSPA12AO43301 675 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 SSX5O60225 188 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 YPEL1O60688 119 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 VENTXO95231 258 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 GSTT2P0CG29 244 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 GSTT2BP0CG30 244 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 ZBTB25P24278 435 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 CEACAM6P40199 344 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 HLA-DRB5Q30154 266 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 Q6ZS49 121 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 OR4A4PQ8NGN8 299 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 MCFD2Q8NI22 146 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 MAFIPQ8WZ33 124 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 YPEL2Q96QA6 119 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 OCSTAMPQ9BR26 566 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 DCUN1D5Q9BTE7 237 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 SLIRPQ9GZT3 109 aaKnown RBP12.56□□□□□ -0.4
DDB1-218ENST00000540784 DPAGT1Q9H3H5 408 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 ADAM30Q9UKF2 790 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 HILPDAQ9Y5L2 63 aa12.56□□□□□ -0.4
DDB1-218ENST00000540784 HOXA3O43365 443 aaPredicted RBP12.55□□□□□ -0.4
DDB1-218ENST00000540784 HLA-DQB1P01920 261 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 PTHLHP12272 177 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 PRSS3P35030 304 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 PPP1CCP36873 323 aaKnown RBP12.55□□□□□ -0.4
DDB1-218ENST00000540784 IER3P46695 156 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 GNMTQ14749 295 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 CT45A1Q5HYN5 189 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 LY6G6FQ5SQ64 297 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 LDLRAD2Q5SZI1 272 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 LDLRAD3Q86YD5 345 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 LINC00311Q8N616 119 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 ZDHHC22Q8N966 263 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 CT45A3Q8NHU0 189 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 SSMEM1Q8WWF3 244 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 SSX3Q99909 188 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 C6orf62Q9GZU0 229 aaPredicted RBP12.55□□□□□ -0.4
DDB1-218ENST00000540784 ZNRD1Q9P1U0 126 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 EXTL2Q9UBQ6 330 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 SLC23A1Q9UHI7 598 aa12.55□□□□□ -0.4
DDB1-218ENST00000540784 ZFHX3Q15911 3703 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 LY6LH3BQJ8 138 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 PAX6P26367 422 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 CBX5P45973 191 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 ZNF134P52741 427 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 MADCAM1Q13477 382 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 SLC9A3R2Q15599 337 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 TPTE2P1Q5T6R2 138 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 SLC25A48Q6ZT89 311 aaKnown RBP12.54□□□□□ -0.4
DDB1-218ENST00000540784 DYNAPQ8N1N2 210 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 NXF2Q9GZY0 626 aaKnown RBP12.54□□□□□ -0.4
DDB1-218ENST00000540784 MIXL1Q9H2W2 232 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 ESM1Q9NQ30 184 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 TNFRSF19Q9NS68 423 aa12.54□□□□□ -0.4
DDB1-218ENST00000540784 IGKV1D-8A0A087WSZ0 117 aa12.53□□□□□ -0.4
DDB1-218ENST00000540784 IGKV1-6A0A0C4DH72 117 aa12.53□□□□□ -0.4
DDB1-218ENST00000540784 BTBD17A6NE02 478 aa12.53□□□□□ -0.4
DDB1-218ENST00000540784 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms