RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 COL5A1P20908 1838 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 OR2W5A6NFC9 320 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 SNURFLB1AK76 121 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 CDC42EP2O14613 210 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HYAL3O43820 417 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BKO60814 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 CD74P04233 296 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 IGKV3-11P04433 115 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 TYMSP04818 313 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BJP06899 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BOP23527 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BBP33778 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BDP58876 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 RHOBP62745 196 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BCP62807 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 PLCXD2Q0VAA5 305 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 POU2AF1Q16633 256 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST2H2BEQ16778 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-214ENST00000540109 UNQ5815/PRO19632Q6UWF5 114 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF664Q8N3J9 261 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BHQ93079 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BNQ99877 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BMQ99879 126 aa5.3□□□□□ -1.56
PTPRD-214ENST00000540109 ALOX12BO75342 701 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 CELA2BP08218 269 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H1EP10412 219 aaKnown RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 DEFB110Q30KQ9 67 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 DCAF10Q5QP82 559 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 C1orf194Q5T5A4 169 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM225Q6GV28 225 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 SSX8Q7RTT4 187 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 GVQW1Q8N7I0 195 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 APCDD1LQ8NCL9 501 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 OR1N1Q8NGS0 311 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 Q8WTZ3 238 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM186Q96B77 213 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 HIST1H2BLQ99880 126 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 PRO3102Q9H379 93 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FNDC4Q9H6D8 234 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 NGBQ9NPG2 151 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 IGLV3-12A0A075B6K2 115 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 UBE2L5PA0A1B0GUS4 154 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 DANCRP0C864 163 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 MPLP40238 635 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 KIR2DS2P43631 304 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 NUP210LQ5VU65 1888 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 LYSMD4Q5XG99 296 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 RHBDD2Q6NTF9 364 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 KIRREL2Q6UWL6 708 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 WDFY1Q8IWB7 410 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 HIST3H2BBQ8N257 126 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 ADAD2Q8NCV1 583 aaKnown RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 GJC3Q8NFK1 279 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 OR51H1Q8NH63 302 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 NEUROG1Q92886 237 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 SFXN3Q9BWM7 321 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 A0A1B0GU03 582 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 RNF222A6NCQ9 220 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 C2orf72A6NCS6 295 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 RPL27P61353 136 aaKnown RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 HERVK_113P61574 105 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 ZNF542PQ5EBM4 170 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM57BQ71RH2 274 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 LINC00346Q8IVM7 164 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 Q8IYB0 196 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 EDARADDQ8WWZ3 215 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 NUDT22Q9BRQ3 303 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 SNHG12Q9BXW3 62 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 PRRG4Q9BZD6 226 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 HELTA6NFD8 242 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 OR5B21A6NL26 309 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 TMEM238C9JI98 176 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 TUSC2O75896 110 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 CD79AP11912 226 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 SLC25A6P12236 298 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 CEACAM1P13688 526 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 CAMPP49913 170 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 RPS16P62249 146 aaKnown RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 HES1Q14469 280 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 RTN4RL2Q86UN3 420 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 KISS1RQ969F8 398 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-214ENST00000540109 ADTRPQ96IZ2 230 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 SOSTQ9BQB4 213 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 VSIG4Q9Y279 399 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A10PA6NDY2 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A18PA6NE21 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A16PA6NEW6 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A20PA6NIJ5 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A8PA6NJQ4 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A7PA6NKC0 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A22PA8MWA6 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A12PA8MX19 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A5PA8MXJ8 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A23PA8MXZ1 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 NXPH2O95156 264 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 IGHMP01871 453 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 CSN3P07498 182 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A15PP0C7V4 464 aa5.29□□□□□ -1.56
PTPRD-214ENST00000540109 FAM90A13PP0C7W8 464 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms