RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 ZNF2Q9BSG1 426 aaPredicted RBP14.19□□□□□ -0.14
COPS3-212ENST00000539941 METTL1Q9UBP6 276 aaKnown RBP14.19□□□□□ -0.14
COPS3-212ENST00000539941 OR5H14A6NHG9 310 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 SPDEFO95238 335 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 CRYBA1P05813 215 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 MUC20Q8N307 709 aaPredicted RBP14.18□□□□□ -0.14
COPS3-212ENST00000539941 KCNRGQ8N5I3 272 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 GCSAMQ8N6F7 178 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 OR52B4Q8NGK2 314 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 OR11L1Q8NGX0 322 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 SEC11CQ9BY50 192 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 GCM1Q9NP62 436 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 RNF7Q9UBF6 113 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 MIOXQ9UGB7 285 aa14.18□□□□□ -0.14
COPS3-212ENST00000539941 C5orf52A6NGY3 159 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 B9A039 149 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.17□□□□□ -0.14
COPS3-212ENST00000539941 EGR1P18146 543 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 UQCRFS1P47985 274 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 PAX5Q02548 391 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 DHRS2Q13268 280 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 SPRNQ5BIV9 151 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 LPCAT3Q6P1A2 487 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 LYG2Q86SG7 212 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 C15orf54Q8N8G6 183 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 OR2AK2Q8NG84 335 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 PLPPR1Q8TBJ4 325 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 TCTEX1D2Q8WW35 142 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 TMEM204Q9BSN7 226 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 EGLN1Q9GZT9 426 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 C5orf66Q9H5L9 145 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 DNAJB11Q9UBS4 358 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 WIPI2Q9Y4P8 454 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 HCFC1P51610 2035 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 BCL2L11O43521 198 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 TK1P04183 234 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 ZBTB25P24278 435 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 HLA-DRB3P79483 266 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 PEA15Q15121 130 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 TMEM128Q5BJH2 165 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 OR4A4PQ8NGN8 299 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 ITLN2Q8WWU7 325 aaPredicted RBP14.17□□□□□ -0.14
COPS3-212ENST00000539941 ARL11Q969Q4 196 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 MS4A5Q9H3V2 200 aa14.17□□□□□ -0.14
COPS3-212ENST00000539941 TMEM30CPA0ZSE6 113 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 DEFB108AA8MXU0 73 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 GPR31O00270 319 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 SIAH2O43255 324 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 PSPNO60542 156 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 DIRAS3O95661 229 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 HLA-AP01891 365 aaKnown RBP14.16□□□□□ -0.14
COPS3-212ENST00000539941 CTSDP07339 412 aaPredicted RBP14.16□□□□□ -0.14
COPS3-212ENST00000539941 PSG2P11465 335 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 PRDX2P32119 198 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 UCP3P55916 312 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 ZNF124Q15973 351 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 SLC35E4Q6ICL7 350 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 C20orf204Q6ZNR8 217 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 ZNF561Q8N587 486 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 FAM222BQ8WU58 562 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 MOB3AQ96BX8 217 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 MBNL3Q9NUK0 354 aaKnown RBP14.16□□□□□ -0.14
COPS3-212ENST00000539941 CISD1Q9NZ45 108 aaKnown RBP14.16□□□□□ -0.14
COPS3-212ENST00000539941 PCDHB10Q9UN67 800 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 PPP1R3CQ9UQK1 317 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 C14orf166Q9Y224 244 aaKnown RBP14.16□□□□□ -0.14
COPS3-212ENST00000539941 LRRK2Q5S007 2527 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 HIVEP3Q5T1R4 2406 aa14.16□□□□□ -0.14
COPS3-212ENST00000539941 USP9XQ93008 2570 aaPredicted RBP14.15□□□□□ -0.14
COPS3-212ENST00000539941 SLC25A4P12235 298 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 IRF2P14316 349 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 PGAM2P15259 253 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 LOXP28300 417 aaPredicted RBP14.15□□□□□ -0.14
COPS3-212ENST00000539941 FCGR2CP31995 323 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 CEBPDP49716 269 aaPredicted RBP14.15□□□□□ -0.14
COPS3-212ENST00000539941 BLOC1S1P78537 153 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 COL10A1Q03692 680 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 PPP1R1AQ13522 171 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 ATXN7L3Q14CW9 347 aaPredicted RBP14.15□□□□□ -0.14
COPS3-212ENST00000539941 IL34Q6ZMJ4 242 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 ADAD2Q8NCV1 583 aaKnown RBP14.15□□□□□ -0.14
COPS3-212ENST00000539941 PPP1R35Q8TAP8 253 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 RXFP4Q8TDU9 374 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 RTBDNQ9BSG5 229 aaPredicted RBP14.15□□□□□ -0.14
COPS3-212ENST00000539941 CABLES2Q9BTV7 478 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 SMCO4Q9NRQ5 59 aa14.15□□□□□ -0.14
COPS3-212ENST00000539941 ANKHD1Q8IWZ3 2542 aaKnown RBP14.15□□□□□ -0.14
COPS3-212ENST00000539941 PTPN13Q12923 2485 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 C9orf170A2RU37 121 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 LRRC30A6NM36 301 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 ZG16O60844 167 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 SCTP09683 121 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 AKR1C4P17516 323 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 OR3A1P47881 315 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 RAB4BP61018 213 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 HERV-K104P61576 105 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 IL13RA1P78552 427 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 ZNF672Q499Z4 452 aaPredicted RBP14.14□□□□□ -0.15
COPS3-212ENST00000539941 TMEM88Q6PEY1 159 aa14.14□□□□□ -0.15
COPS3-212ENST00000539941 SLC16A13Q7RTY0 426 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms