RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TATDN3Q17R31 274 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 OR10V1Q8NGI7 309 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 IDI2-AS1Q9NZ38 188 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 GNG12Q9UBI6 72 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 JPT1Q9UK76 154 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 GPR132Q9UNW8 380 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 OR2W1Q9Y3N9 320 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 VWC2LB2RUY7 222 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 PPP1CCP36873 323 aaKnown RBP13.32□□□□□ -0.28
TRAF3-204ENST00000539721 FAM53AQ6NSI3 398 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-204ENST00000539721 SECTM1Q8WVN6 248 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 RAB39BQ96DA2 213 aa13.32□□□□□ -0.28
TRAF3-204ENST00000539721 RPUSD1Q9UJJ7 312 aaKnown RBP13.32□□□□□ -0.28
TRAF3-204ENST00000539721 C14orf166Q9Y224 244 aaKnown RBP13.32□□□□□ -0.28
TRAF3-204ENST00000539721 IGHV4-30-2A0A087WSY4 118 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 A0A0B4J293 547 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 MECP2P51608 486 aaKnown RBP13.31□□□□□ -0.28
TRAF3-204ENST00000539721 UCP3P55916 312 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 CLEC12BQ2HXU8 276 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 PRAMEF5Q5TYX0 476 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 CD276Q5ZPR3 534 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 C8orf46Q8TAG6 207 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 ZFAND1Q8TCF1 268 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 DACT3Q96B18 629 aaPredicted RBP13.31□□□□□ -0.28
TRAF3-204ENST00000539721 TOLLIPQ9H0E2 274 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 C5orf66Q9H5L9 145 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 LINC00574Q9H8X3 128 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 RBM7Q9Y580 266 aaKnown RBP13.31□□□□□ -0.28
TRAF3-204ENST00000539721 ALG5Q9Y673 324 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 CENPEQ02224 2701 aa13.31□□□□□ -0.28
TRAF3-204ENST00000539721 ANKRD17O75179 2603 aaKnown RBP13.3□□□□□ -0.28
TRAF3-204ENST00000539721 PPIAL4CA0A0B4J2A2 164 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 IGKV1D-13A0A0B4J2D9 117 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 A0A1W2PPH5 198 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 PRAF2O60831 178 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 PPIAL4GP0DN37 164 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 IGKV1-13P0DP09 117 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 PI3P19957 117 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 NFYBP25208 207 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 LUMP51884 338 aaPredicted RBP13.3□□□□□ -0.28
TRAF3-204ENST00000539721 LOXL3P58215 753 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 LMO4P61968 165 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 TMEM30BQ3MIR4 351 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 SLC38A6Q8IZM9 456 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 LRRC75A-AS1Q8N1F1 130 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 ADAD2Q8NCV1 583 aaKnown RBP13.3□□□□□ -0.28
TRAF3-204ENST00000539721 SLC5A7Q9GZV3 580 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 PARP12Q9H0J9 701 aaKnown RBP13.3□□□□□ -0.28
TRAF3-204ENST00000539721 GFOD1Q9NXC2 390 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 PTPN13Q12923 2485 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 MALRD1Q5VYJ5 2156 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 LOC105371242A0A075B767 164 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 C22orf46C9J442 243 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 YPEL1O60688 119 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 MMP23AO75900 390 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 RGS11O94810 467 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 CTSDP07339 412 aaPredicted RBP13.3□□□□□ -0.28
TRAF3-204ENST00000539721 VSIG10L2P0DP72 767 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 TAS2R31P59538 309 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 LPCAT3Q6P1A2 487 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 HEPN1Q6WQI6 88 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 OR10A7Q8NGE5 316 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 CAPSLQ8WWF8 208 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 YPEL2Q96QA6 119 aa13.3□□□□□ -0.28
TRAF3-204ENST00000539721 RTBDNQ9BSG5 229 aaPredicted RBP13.3□□□□□ -0.28
TRAF3-204ENST00000539721 IGHV4-61A0A0C4DH41 118 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 IL5P05113 134 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 LIPFP07098 398 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 OR8U9P0C7N5 309 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 AKR1C4P17516 323 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 DLX6P56179 175 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 C11orf91Q3C1V1 193 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 ABCA11PQ4W5N1 156 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 MORN2Q502X0 79 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 C4orf46Q504U0 113 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 GLDNQ6ZMI3 551 aaPredicted RBP13.29□□□□□ -0.28
TRAF3-204ENST00000539721 SLC25A42Q86VD7 318 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 LY6G5BQ8NDX9 201 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 OR52M1Q8NGK5 317 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 OR8U1Q8NH10 309 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 EDARADDQ8WWZ3 215 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 MBD6Q96DN6 1003 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 SEC22CQ9BRL7 303 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 RSRP1Q9BUV0 290 aa13.29□□□□□ -0.28
TRAF3-204ENST00000539721 ALX4Q9H161 411 aaPredicted RBP13.29□□□□□ -0.28
TRAF3-204ENST00000539721 KIAA1324LA8MWY0 1029 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-204ENST00000539721 HSD17B6O14756 317 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 OR4E1P0C645 316 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 SLC25A16P16260 332 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 ERVFRD-1P60508 538 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 CBX3Q13185 183 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 METTL11BQ5VVY1 283 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 LDLRAD3Q86YD5 345 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 GPN1Q9HCN4 374 aaPredicted RBP13.28□□□□□ -0.28
TRAF3-204ENST00000539721 CCL28Q9NRJ3 127 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 KCNS2Q9ULS6 477 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 NBPF19A0A087WUL8 3843 aa13.28□□□□□ -0.28
TRAF3-204ENST00000539721 A0A0A6YYJ9 748 aa13.27□□□□□ -0.28
TRAF3-204ENST00000539721 IGHV3-7P01780 117 aa13.27□□□□□ -0.28
TRAF3-204ENST00000539721 ZFP36P26651 326 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms