RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 SLC25A24Q6NUK1 477 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 DBX2Q6ZNG2 339 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 BCL2L2Q92843 193 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-210ENST00000539599 SPIN2AQ99865 258 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 SPIN2BQ9BPZ2 258 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 TINAGQ9UJW2 476 aa11.9□□□□□ -0.5
UBE3B-210ENST00000539599 RAMP3O60896 148 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 MPV17P39210 176 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 SRPXP78539 464 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 TMEM164Q5U3C3 297 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 Q6ZS49 121 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 HAPLN4Q86UW8 402 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF573Q86YE8 665 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 OR10V1Q8NGI7 309 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 OR5D13Q8NGL4 314 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 RAB39BQ96DA2 213 aa11.9□□□□□ -0.51
UBE3B-210ENST00000539599 SPTBN2O15020 2390 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A10PA6NDY2 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A18PA6NE21 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A16PA6NEW6 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A20PA6NIJ5 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A8PA6NJQ4 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A7PA6NKC0 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 ZFP92A6NM28 416 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A22PA8MWA6 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A12PA8MX19 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A5PA8MXJ8 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A23PA8MXZ1 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 H3BQ15 152 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 PSPNO60542 156 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A15PP0C7V4 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A13PP0C7W8 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A14PP0C7W9 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FAM90A24PP0C7X0 464 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 DEFA4P12838 97 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 PMELP40967 661 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 ICAM4Q14773 271 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 SAXO1Q8IYX7 474 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 ABI3Q9P2A4 366 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 S100A6P06703 90 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 CEACAM6P40199 344 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 ELLP55199 621 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-210ENST00000539599 ARG2P78540 354 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF585BQ52M93 769 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 FBXW9Q5XUX1 488 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 MDS2Q8NDY4 140 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 OR1L1Q8NH94 360 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 SLC25A40Q8TBP6 338 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 PBDC1Q9BVG4 233 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 SLC25A31Q9H0C2 315 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF665Q9H7R5 613 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 UFSP2Q9NUQ7 469 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 ATPIF1Q9UII2 106 aa11.89□□□□□ -0.51
UBE3B-210ENST00000539599 NXPH2O95156 264 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 SP9P0CG40 484 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 AKR1C8PQ5T2L2 129 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 BTNL3Q6UXE8 466 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 ZPBPQ9BS86 351 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 EGLN1Q9GZT9 426 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 GP6Q9HCN6 339 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 IGHV3-43A0A0B4J1X8 118 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 C5orf52A6NGY3 159 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 SMPD2O60906 423 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 OR2C1O95371 312 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 MT-ND4LP03901 98 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 CD55P08174 381 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 SRP19P09132 144 aaKnown RBP11.88□□□□□ -0.51
UBE3B-210ENST00000539599 IGHV3-43DP0DP04 118 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 COX5BP10606 129 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 IGHV1-2P23083 117 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 RAB5CP51148 216 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF816Q0VGE8 651 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-210ENST00000539599 LTC4SQ16873 150 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 SPANXN5Q5MJ07 72 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 Q6ZR03 302 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 C5orf30Q96GV9 206 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 ATP5SQ99766 215 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 AKAP13Q12802 2813 aa11.88□□□□□ -0.51
UBE3B-210ENST00000539599 BSNQ9UPA5 3926 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 TRGV5A0A0B4J1U4 118 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
UBE3B-210ENST00000539599 IGHV3-13P01766 116 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 IGHV3-7P01780 117 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 CXCL1P09341 107 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 PPP1CBP62140 327 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 IL24Q13007 206 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 ZNF726P1Q15940 193 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 OR8G2PQ6IF36 304 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 BEND4Q6ZU67 534 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 CNEP1R1Q8N9A8 125 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 OR52L2PQ8NGH6 319 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 RPRMQ9NS64 109 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 HEATR1Q9H583 2144 aaKnown RBP11.87□□□□□ -0.51
UBE3B-210ENST00000539599 INTS1Q8N201 2190 aaKnown RBP11.87□□□□□ -0.51
UBE3B-210ENST00000539599 DEFB108AA8MXU0 73 aa11.87□□□□□ -0.51
UBE3B-210ENST00000539599 J3QT63 122 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms