RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SKP2Q13309 424 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 SAXO1Q8IYX7 474 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 OR8B3Q8NGG8 313 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 ZCCHC14Q8WYQ9 949 aaKnown RBP6.05□□□□□ -1.44
SORT1-209ENST00000538502 SMIM8Q96KF7 97 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 MIEN1Q9BRT3 115 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 CBLN4Q9NTU7 201 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 PRR13Q9NZ81 148 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 OR51B2Q9Y5P1 312 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 TRPM3Q9HCF6 1732 aaPredicted RBP6.05□□□□□ -1.44
SORT1-209ENST00000538502 FBLL1A6NHQ2 334 aaKnown RBP6.05□□□□□ -1.44
SORT1-209ENST00000538502 TNFSF14O43557 240 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 SOD3P08294 240 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 LGALS7P47929 136 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 PGFP49763 221 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 RND3P61587 244 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 OR10D3Q8NH80 312 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 TRMT61AQ96FX7 289 aaKnown RBP6.05□□□□□ -1.44
SORT1-209ENST00000538502 ASCL3Q9NQ33 180 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 C1RLQ9NZP8 487 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 HCSTQ9UBK5 93 aa6.05□□□□□ -1.44
SORT1-209ENST00000538502 AHDC1Q5TGY3 1603 aaPredicted RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 A0A1B0GW15 77 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 A1L4Q6 167 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 NUDT3O95989 172 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 OR4A8P0C604 315 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 ZNF735P0CB33 412 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 HOXA4Q00056 320 aaPredicted RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 ROM1Q03395 351 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 GPBAR1Q8TDU6 330 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 MARS2Q96GW9 593 aaKnown RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 PARLQ9H300 379 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 GLI3P10071 1580 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 SPRY3O43610 288 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 GCM2O75603 506 aaPredicted RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 NDUFB4O95168 129 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 LINC00869P0C866 280 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 ID1P41134 155 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 KIR3DL2P43630 455 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 EFNB2P52799 333 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 DUSP2Q05923 314 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 TNXAQ16473 311 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 RSPO2Q6UXX9 243 aaPredicted RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 OR8I2Q8N0Y5 310 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 ONECUT1Q9UBC0 465 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 C17orf51A8MQB3 221 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 GNG7O60262 68 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 HYPMO75409 117 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 TNFAIP6P98066 277 aaPredicted RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 PSG9Q00887 426 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 SPINK9Q5DT21 86 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 CALHM1Q8IU99 346 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 POC1AQ8NBT0 407 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 SYT8Q8NBV8 401 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 OR2I1PQ8NGU4 316 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 OR2H1Q9GZK4 316 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 MRPS18BQ9Y676 258 aaKnown RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 DEFB108AA8MXU0 73 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 UBE2CO00762 179 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 RECKO95980 971 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 UQCRFS1P47985 274 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 P2RY4P51582 365 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 MEF2CQ06413 473 aaPredicted RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 SAMD13Q5VXD3 122 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 ANKRD33Q7Z3H0 272 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 LINC01555Q8NAE3 123 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 CADM4Q8NFZ8 388 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 SSMEM1Q8WWF3 244 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 RND1Q92730 232 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 FLYWCH2Q96CP2 140 aaKnown RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 SCNM1Q9BWG6 230 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 DPRXA6NFQ7 191 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 SPATA46Q5T0L3 261 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 TCF23Q7RTU1 214 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 WFDC8Q8IUA0 241 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 SELENOHQ8IZQ5 122 aaKnown RBP6.04□□□□□ -1.44
SORT1-209ENST00000538502 TMEM190Q8WZ59 177 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 C8orf44Q96CB5 159 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 WDYHV1Q96HA8 205 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 NDUFAF3Q9BU61 184 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 LOXL2Q9Y4K0 774 aa6.04□□□□□ -1.44
SORT1-209ENST00000538502 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 ZNF788Q6ZQV5 615 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 GALNT14Q96FL9 552 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 ZNF665Q9H7R5 613 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 H0Y8X5 98 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 DLL1O00548 723 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 MPZL1O95297 269 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 CIRBPQ14011 172 aaKnown RBP6.03□□□□□ -1.44
SORT1-209ENST00000538502 LRRC75BQ2VPJ9 315 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 ZNF362Q5T0B9 420 aaPredicted RBP6.03□□□□□ -1.44
SORT1-209ENST00000538502 TCF24Q7RTU0 167 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 BHLHA9Q7RTU4 235 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 GCSAMQ8N6F7 178 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 KCNS1Q96KK3 526 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 LRRC61Q9BV99 259 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 DNASE2O00115 360 aaPredicted RBP6.03□□□□□ -1.44
SORT1-209ENST00000538502 CXCL10P02778 98 aa6.03□□□□□ -1.44
SORT1-209ENST00000538502 TMIGD3P0DMS9 266 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms