RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 TMEM179BQ7Z7N9 219 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 TCEANCQ8N8B7 351 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 C8orf31Q8N9H6 132 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 OR5D14Q8NGL3 314 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 OR1N2Q8NGR9 330 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 CANT1Q8WVQ1 401 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 FGGYQ96C11 551 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 COQ2Q96H96 371 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 OR51J1Q9H342 316 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 IL36RNQ9UBH0 155 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 VSIG4Q9Y279 399 aa4.14□□□□□ -1.75
SNHG1-207ENST00000537965 MRPS28Q9Y2Q9 187 aaKnown RBP4.14□□□□□ -1.75
SNHG1-207ENST00000537965 DNAH9Q9NYC9 4486 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 IGKV1-9A0A0C4DH69 117 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 A0A1W2PQL4 384 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-207ENST00000537965 H3BSH0 61 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 SAP30O75446 220 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 CSTBP04080 98 aaKnown RBP4.13□□□□□ -1.75
SNHG1-207ENST00000537965 IFNA6P05013 189 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 HCKP08631 526 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 HTR1AP08908 422 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 NPSP0C0P6 89 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 FRMD6-AS1P0C7T7 363 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 CALCBP10092 127 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 GP9P14770 177 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 CALB2P22676 271 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 VEGFCP49767 419 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 GNG10P50151 68 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 CCR9P51686 369 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 RPS16P62249 146 aaKnown RBP4.13□□□□□ -1.75
SNHG1-207ENST00000537965 SSBP2P81877 361 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-207ENST00000537965 EFNB1P98172 346 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 RAB32Q13637 225 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 IL13RA2Q14627 380 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 TMEM30BQ3MIR4 351 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 AADACL4Q5VUY2 407 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 ELP2Q6IA86 826 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 FAHD1Q6P587 224 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 Q6ZWC4 215 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 SERPINA12Q8IW75 414 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 RDH10Q8IZV5 341 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 FAM71E2Q8N5Q1 922 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 LINC00311Q8N616 119 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 ZNF491Q8N8L2 437 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 Q8N9W7 124 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 PXT1Q8NFP0 134 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 OR10H4Q8NGA5 316 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 OR13A1Q8NGR1 328 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 OR13C3Q8NGS6 347 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 OR2G2Q8NGZ5 317 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 CNIH3Q8TBE1 160 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 RFT1Q96AA3 541 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 EME1Q96AY2 570 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 FLYWCH2Q96CP2 140 aaKnown RBP4.13□□□□□ -1.75
SNHG1-207ENST00000537965 ADAT3Q96EY9 351 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-207ENST00000537965 KCTD7Q96MP8 289 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 OR4C12Q96R67 309 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 IL4I1Q96RQ9 567 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 MBOAT4Q96T53 435 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 S1PR3Q99500 378 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 TBX5Q99593 518 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 PPIL3Q9H2H8 161 aaKnown RBP4.13□□□□□ -1.75
SNHG1-207ENST00000537965 KIF25Q9UIL4 384 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 GNG8Q9UK08 70 aa4.13□□□□□ -1.75
SNHG1-207ENST00000537965 IGKV1-12A0A0C4DH73 117 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 SNTNA6NMZ2 147 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 A8MZ25 164 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 G3V2T6 193 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 I3L521 148 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 SDCBPO00560 298 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-207ENST00000537965 HSPB6O14558 160 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 ORC5O43913 435 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 FKBP6O75344 327 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 IGKV1D-12P01611 117 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 IGHV3-7P01780 117 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 OR8U9P0C7N5 309 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 CD40LGP29965 261 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 DAPP51397 102 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 PITPNAQ00169 270 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 CFHR3Q02985 330 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 GABPB1Q06547 395 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-207ENST00000537965 TMEM267Q0VDI3 215 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-207ENST00000537965 CDK5R1Q15078 307 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 RSU1Q15404 277 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 KISS1Q15726 138 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 SRSF7Q16629 238 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNHG1-207ENST00000537965 LTC4SQ16873 150 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 ZNF691Q5VV52 312 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 RSBN1Q5VWQ0 802 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-207ENST00000537965 C12orf73Q69YU5 71 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 SSX6Q7RTT6 188 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 LINC00596Q86U02 117 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 SPATA24Q86W54 205 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 LYPD6Q86Y78 171 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 SGPP2Q8IWX5 399 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 HS3ST5Q8IZT8 346 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 PRSS35Q8N3Z0 413 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 STX19Q8N4C7 294 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 Q8N6K4 173 aa4.12□□□□□ -1.75
SNHG1-207ENST00000537965 TCTEX1D1Q8N7M0 179 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms