RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CD34P28906 385 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 DYNLT3P51808 116 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 PLAC9Q5JTB6 97 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 UTF1Q5T230 341 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 FOXB2Q5VYV0 432 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 TREML4Q6UXN2 200 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 OR13A1Q8NGR1 328 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 PECRQ9BY49 303 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 NCOR1P1Q9H4R4 102 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 RANBP3Q9H6Z4 567 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ZNF286AQ9HBT8 521 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ABCB10Q9NRK6 738 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 KIF25Q9UIL4 384 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 A0A075B6Q4 140 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 A0A087X0M5 115 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 A0A1B0GX30 115 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 A6NDX4 124 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 RGS5O15539 181 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 APOA1P02647 267 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 HIST1H1DP16402 221 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 HTR1DP28221 377 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ZNF497Q6ZNH5 498 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 RTN4RL2Q86UN3 420 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 TMEM219Q86XT9 240 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ZNF565Q8N9K5 539 aa14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 SLIRPQ9GZT3 109 aaKnown RBP14.37□□□□□ -0.11
TNFRSF1A-209ENST00000536717 KBTBD11-OT1A0A1B0GTJ5 212 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 HPGDSO60760 199 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 GNB3P16520 340 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 GLP1RP43220 463 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 MRPS15P82914 257 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 OR4C13Q8NGP0 309 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 MCFD2Q8NI22 146 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ZNF596Q8TC21 504 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 KIRREL1Q96J84 757 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 NPFFR1Q9GZQ6 430 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 C6orf62Q9GZU0 229 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 SERPINE3A8MV23 424 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 MFNGO00587 321 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 MT-ND4P03905 459 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 RIMS4Q9H426 269 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CHMP1AQ9HD42 196 aaPredicted RBP14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CALYQ9NYX4 217 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 DPM3Q9P2X0 92 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 AK3Q9UIJ7 227 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ADAM30Q9UKF2 790 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 TRAPPC2LQ9UL33 140 aa14.36□□□□□ -0.11
TNFRSF1A-209ENST00000536717 TRAV18A0A075B6X5 111 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 FAM25AB3EWG3 89 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 FAM25CB3EWG5 89 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 FAM25GB3EWG6 89 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 TIMM23O14925 209 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 XRCC3O43542 346 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 EIF4EP06730 217 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 GSTP1P09211 210 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CD3GP09693 182 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 HLA-DRB5Q30154 266 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CDNFQ49AH0 187 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 TMEM69Q5SWH9 247 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 GAPTQ8N292 157 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 OR4K15Q8NH41 348 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 OR2T6Q8NHC8 308 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CCDC107Q8WV48 283 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CYYR1Q96J86 154 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CMSS1Q9BQ75 279 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 LINC00574Q9H8X3 128 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ZNF702PQ9H963 129 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 PITPNC1Q9UKF7 332 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 KCNK7Q9Y2U2 307 aa14.35□□□□□ -0.11
TNFRSF1A-209ENST00000536717 NPIPB11E5RHQ5 1161 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 F2RL2O00254 374 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ELK1P19419 428 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 NFYBP25208 207 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ARFRP1Q13795 201 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 MRGPRDQ8TDS7 321 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 NXF2Q9GZY0 626 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 C12orf4Q9NQ89 552 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 NOTCH1P46531 2555 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 MEGF8Q7Z7M0 2845 aa14.34□□□□□ -0.11
TNFRSF1A-209ENST00000536717 TRAV39A0A0B4J263 110 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 LEUTXA8MZ59 168 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 BUB1B-PAK6H3BSN5 160 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 M0QZ24 198 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 CTDSP2O14595 271 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 GZMHP20718 246 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 SSTR5P35346 364 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TALDO1P37837 337 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MNDAP41218 407 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 HABP2Q14520 560 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 C6orf183Q5T699 404 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 Q8N2B8 174 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MRPL30Q8TCC3 161 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 MMP27Q9H306 513 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 IDI2-AS1Q9NZ38 188 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 A3GALT2U3KPV4 340 aa14.33□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TMEM235A6NFC5 223 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 LY6LH3BQJ8 138 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 TOR1AO14656 332 aa14.32□□□□□ -0.12
TNFRSF1A-209ENST00000536717 NAPSAO96009 420 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms