RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 IL22RA2Q969J5 263 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 TSACCQ96A04 125 aaPredicted RBP5.64□□□□□ -1.51
USP28-202ENST00000535607 BBC3Q96PG8 261 aaPredicted RBP5.64□□□□□ -1.51
USP28-202ENST00000535607 PYGO2Q9BRQ0 406 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 PSMG3Q9BT73 122 aaPredicted RBP5.64□□□□□ -1.51
USP28-202ENST00000535607 MAP1LC3BQ9GZQ8 125 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 SH3BGRL3Q9H299 93 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 OR51I2Q9H344 312 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 GAL3ST2Q9H3Q3 398 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 BANF2Q9H503 90 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 CHODLQ9H9P2 273 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 ELL3Q9HB65 397 aaPredicted RBP5.64□□□□□ -1.51
USP28-202ENST00000535607 SERINC1Q9NRX5 453 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 HRASLS2Q9NWW9 162 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 GNG13Q9P2W3 67 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 COPS7AQ9UBW8 275 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 TBC1D29Q9UFV1 150 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 GAB2Q9UQC2 676 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 HS3ST3B1Q9Y662 390 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 CACNA1EQ15878 2313 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 THADAQ6YHU6 1953 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 FRYLO94915 3013 aa5.64□□□□□ -1.51
USP28-202ENST00000535607 A0A0A6YYD4 124 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 A0A0U1RQV5 110 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 C3orf85A0A1B0GTC6 90 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 A0A1B0GV50 99 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 LILRA5A6NI73 299 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 DHRS7CA6NNS2 312 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 ZNF705FA8MVS1 300 aaPredicted RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 H0YIG0 161 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 TMEM250H0YL14 139 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 MASP2O00187 686 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 PHF1O43189 567 aaPredicted RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 DHHO43323 396 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 NPIPB7O75200 414 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 VENTXO95231 258 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 DDAH2O95865 285 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 HRASP01112 189 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 IGHG1P01857 330 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 CTXN2P0C2S0 81 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 ZNF705DP0CH99 300 aaPredicted RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 ZNF705BP0CI00 300 aaPredicted RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 SLC25A6P12236 298 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 CD99P14209 185 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 AADACP22760 399 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 OR1D4P47884 311 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 PSMB3P49720 205 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 FHITP49789 147 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 TMEM50BP56557 158 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 TPPP2P59282 170 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 HSF1Q00613 529 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 ENDOGQ14249 297 aaKnown RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 HERPUD1Q15011 391 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 KISS1Q15726 138 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 CD226Q15762 336 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 NNATQ16517 81 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 BSXQ3C1V8 233 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 GFI1BQ5VTD9 330 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 CBLN3Q6UW01 205 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 ZNF705AQ6ZN79 300 aaPredicted RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 Q6ZPA2 131 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 SSX7Q7RTT5 188 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 TIPARPQ7Z3E1 657 aaKnown RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 RD3Q7Z3Z2 195 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 LINC00346Q8IVM7 164 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 OR5AS1Q8N127 324 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 OR2D3Q8NGH3 330 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 OR2T10Q8NGZ9 312 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 GPR119Q8TDV5 335 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 MBD3L1Q8WWY6 194 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 C11orf40Q8WZ69 217 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 TOMM40LQ969M1 308 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 SPSB1Q96BD6 273 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 PGAM5Q96HS1 289 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 JSRP1Q96MG2 331 aaPredicted RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 RAB40CQ96S21 281 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 MIEN1Q9BRT3 115 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 WFDC1Q9HC57 220 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 MANBALQ9NQG1 85 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 SLC2A9Q9NRM0 540 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 KLHL13Q9P2N7 655 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 NAGKQ9UJ70 344 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 LAMP3Q9UQV4 416 aa5.63□□□□□ -1.51
USP28-202ENST00000535607 YLPM1P49750 1951 aaKnown RBP5.63□□□□□ -1.51
USP28-202ENST00000535607 COL5A1P20908 1838 aaPredicted RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 DOCK9Q9BZ29 2069 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 TRAV9-1A0A075B6T8 112 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 KIR2DL5BA0A0G2JN68 375 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 KIR2DL5BA0A0G2JPC4 375 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 A0A1W2PNV4 684 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 A0A1W2PPQ1 181 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 VSTM2BA6NLU5 285 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 HMGB3O15347 200 aaKnown RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 XRCC2O43543 280 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 SOX15O60248 233 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 LMX1BO60663 402 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 C1QL1O75973 258 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 TYMSP04818 313 aa5.62□□□□□ -1.51
USP28-202ENST00000535607 SNRPCP09234 159 aaKnown RBP5.62□□□□□ -1.51
USP28-202ENST00000535607 FGF5P12034 268 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms