RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 RP1L1Q8IWN7 2480 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 USP54Q70EL1 1684 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 CELA2AP08217 269 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 FAM74A3Q4VXF1 159 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 AWAT1Q58HT5 328 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 ZNF841Q6ZN19 808 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 TPRX1Q8N7U7 411 aa15.8■□□□□ 0.12
SFSWAP-203ENST00000535236 DHRS7CA6NNS2 312 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 B4DEV8 164 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 MRGPRGQ86SM5 289 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 GCSAMQ8N6F7 178 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 OR10J6PQ8NGY7 276 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 OR4A5Q8NH83 315 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 CBY1Q9Y3M2 126 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 RREB1Q92766 1687 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 ASCC3Q8N3C0 2202 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 A0A1W2PS18 150 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 MC5RP33032 325 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 HOGA1Q86XE5 327 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 HDHD3Q9BSH5 251 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 PRO1933Q9H354 126 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 CTXND1A0A1B0GTU2 59 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 SMIM12Q96EX1 92 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 EAF1Q96JC9 268 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 SOSTQ9BQB4 213 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 C16orf92Q96LL3 132 aa15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 METTL1Q9UBP6 276 aaKnown RBP15.79■□□□□ 0.12
SFSWAP-203ENST00000535236 TM4SF20Q53R12 229 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 ITLN1Q8WWA0 313 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 HSPB8Q9UJY1 196 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 DLK1P80370 383 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 TMEM78Q5T7P6 136 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 OR8A1Q8NGG7 326 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 APCSP02743 223 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 ZNF137PP52743 207 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 METTL26Q96S19 204 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 IGHV3-72A0A0B4J1Y9 119 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 KLF7O75840 302 aaPredicted RBP15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 CTSSP25774 331 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 M0R3E3 92 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 UBE2L6O14933 153 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 C19orf54Q5BKX5 351 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 MIEN1Q9BRT3 115 aa15.78■□□□□ 0.12
SFSWAP-203ENST00000535236 IFNL4K9M1U5 179 aa15.77■□□□□ 0.12
SFSWAP-203ENST00000535236 IGKV1D-16P01601 117 aa15.77■□□□□ 0.12
SFSWAP-203ENST00000535236 NGFRP08138 427 aa15.77■□□□□ 0.12
SFSWAP-203ENST00000535236 ELOA3CA0A087WX78 387 aaPredicted RBP15.77■□□□□ 0.12
SFSWAP-203ENST00000535236 GFRA3O60609 400 aa15.77■□□□□ 0.11
SFSWAP-203ENST00000535236 HBZP02008 142 aa15.77■□□□□ 0.11
SFSWAP-203ENST00000535236 SLC22A18ASQ8N1D0 253 aa15.77■□□□□ 0.11
SFSWAP-203ENST00000535236 LRRC3BQ96PB8 259 aa15.77■□□□□ 0.11
SFSWAP-203ENST00000535236 ZDHHC8Q9ULC8 765 aa15.77■□□□□ 0.11
SFSWAP-203ENST00000535236 HIST1H1BP16401 226 aaKnown RBP15.77■□□□□ 0.11
SFSWAP-203ENST00000535236 NEURL2Q9BR09 285 aa15.77■□□□□ 0.11
SFSWAP-203ENST00000535236 CEACAM18A8MTB9 384 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 ZNF880Q6PDB4 577 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 SYT8Q8NBV8 401 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 SCNM1Q9BWG6 230 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 CCL27Q9Y4X3 112 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 A0A0U1RQV5 110 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 FCGR3AP08637 254 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 IER3P46695 156 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 IL11P20809 199 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 TWIST1Q15672 202 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 GUCD1Q96NT3 240 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 PRSS23O95084 383 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 UNQ5815/PRO19632Q6UWF5 114 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 ZNF738Q8NE65 137 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 NUP37Q8NFH4 326 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 WNT2BQ93097 391 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 IGHV3OR16-12A0A075B7B8 117 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 SULT1A2P50226 295 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 AMMECR1LQ6DCA0 310 aa15.76■□□□□ 0.11
SFSWAP-203ENST00000535236 SIAH2O43255 324 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 FGF5P12034 268 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 MPV17P39210 176 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 RELBQ01201 579 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 HSD17B13Q7Z5P4 300 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 ZPLD1Q8TCW7 415 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 DDB2Q92466 427 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 NPVFQ9HCQ7 196 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 V9GYH0 126 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 SNURFLB1AK76 121 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 SPRED2Q7Z698 418 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 FADS6Q8N9I5 356 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 MRPL30Q8TCC3 161 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 TMEM189A5PLL7 270 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 NPIPB8E9PQR5 432 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 DXOO77932 396 aaKnown RBP15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 FGF12P61328 243 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 STPG3Q8N7X2 389 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 OR1N2Q8NGR9 330 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 WNT9BO14905 357 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 EFNB2P52799 333 aa15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 LGALSLQ3ZCW2 172 aaPredicted RBP15.75■□□□□ 0.11
SFSWAP-203ENST00000535236 PTP4A3O75365 173 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 MAS1LP35410 378 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 GFRA1P56159 465 aa15.74■□□□□ 0.11
SFSWAP-203ENST00000535236 OR5AU1Q8NGC0 362 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms