RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 PXT1Q8NFP0 134 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OR8J2Q8NGG1 315 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OR2T35Q8NGX2 323 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OR2T29Q8NH02 315 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OR4Q3Q8NH05 313 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OR5J2Q8NH18 312 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 RNASEH2CQ8TDP1 164 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 GNPDA2Q8TDQ7 276 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ACOT11Q8WXI4 607 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 ACOT12Q8WYK0 555 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 AP3S1Q92572 193 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 NRGNQ92686 78 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ADIPOR1Q96A54 375 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CMTM7Q96FZ5 175 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 MED8Q96G25 268 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SMIM10Q96HG1 83 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 PYURFQ96I23 114 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ITCHQ96J02 903 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 TEX37Q96LM6 180 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 NOL4LQ96MY1 436 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 ZNF426Q9BUY5 554 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SLC38A1Q9H2H9 487 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 OR51B6Q9H340 312 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 REEP4Q9H6H4 257 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 NMNAT1Q9HAN9 279 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 PLEKHA1Q9HB21 404 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 POPDC3Q9HBV1 291 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 EML4Q9HC35 981 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 LYRM4Q9HD34 91 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 SLC17A5Q9NRA2 495 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CTPS2Q9NRF8 586 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CUTCQ9NTM9 273 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 TXNL4BQ9NX01 149 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 DUX4Q9UBX2 424 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ZNF629Q9UEG4 869 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 TAC3Q9UHF0 121 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 FARSAQ9Y285 508 aaKnown RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 KCNIP3Q9Y2W7 256 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 MEMO1Q9Y316 297 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 RHBDD3Q9Y3P4 386 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 POLR3HQ9Y535 204 aaPredicted RBP2.6□□□□□ -1.99
USP48-215ENST00000534705 ORC6Q9Y5N6 252 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 CELSR2Q9HCU4 2923 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 PRR14LQ5THK1 2151 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 ITPR2Q14571 2701 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 AKAP9Q99996 3911 aa2.6□□□□□ -1.99
USP48-215ENST00000534705 DOPEY1Q5JWR5 2465 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 KCNE1BA0A087WTH5 132 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 A0A1B0GX78 115 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 LRP5LA4QPB2 252 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 IDSB3KWA1 339 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 DISC1C4P0D8 188 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 C5orf58C9J3I9 102 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 CXCR6O00574 342 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TP53I11O14683 189 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 EMC8O43402 210 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 FADS1O60427 444 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 MPZL2O60487 215 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SRPX2O60687 465 aaPredicted RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 ALOX12BO75342 701 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 RP2O75695 350 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OR2J3O76001 311 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TOXO94900 526 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 DIRAS1O95057 198 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 IFNA17P01571 189 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 CD8AP01732 235 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 STATHP02808 62 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 CD5P06127 495 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 CD3GP09693 182 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 GKN3PP0CG01 181 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 C1GALT1C1LP0DN25 315 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 PSMA1P25786 263 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 CMPK1P30085 196 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 RPL4P36578 427 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 GPR4P46093 362 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 OR1D4P47884 311 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 SRP9P49458 86 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 RAB5CP51148 216 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TDGF1P3P51864 188 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 POLR2JP52435 117 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 HCCSP53701 268 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 REEP5Q00765 189 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 RBBP4Q09028 425 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 FAM53BQ14153 422 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 EIF2B1Q14232 305 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 TSNQ15631 228 aaKnown RBP2.59□□□□□ -1.99
USP48-215ENST00000534705 VAMP3Q15836 100 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 Q1RN00 199 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 PYDC2Q56P42 97 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 MESTQ5EB52 335 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 ZNF678Q5SXM1 525 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 BCL2L15Q5TBC7 163 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 FAM219BQ5XKK7 198 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 ADNP2Q6IQ32 1131 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 ACSM5Q6NUN0 579 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 TMEM205Q6UW68 189 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 IGFL2Q6UWQ7 119 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 ALKAL2Q6UX46 152 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 DRAM2Q6UX65 266 aa2.59□□□□□ -1.99
USP48-215ENST00000534705 CLEC18BQ6UXF7 455 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms